RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 ABCF3Q9NUQ8 709 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 MANSC4A6NHS7 340 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 MMP8P22894 467 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 NOL9Q5SY16 702 aaKnown RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 PARP9Q8IXQ6 854 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 COLGALT1Q8NBJ5 622 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 PPP1R36Q96LQ0 422 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 RPRD1AQ96P16 312 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-201ENST00000314191 TASP1Q9H6P5 420 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 PRDM4Q9UKN5 801 aa6.42□□□□□ -1.38
PRKDC-201ENST00000314191 KIF13AQ9H1H9 1805 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 APOC4-APOC2K7ER74 178 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 USP12O75317 370 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 CILPO75339 1184 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 ZWINTO95229 277 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 APOC2P02655 101 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 SPRP35270 261 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 KPNA2P52292 529 aaKnown RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 TSTA3Q13630 321 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 NLRP9Q7RTR0 991 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 CHSY1Q86X52 802 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 ELOVL4Q9GZR5 314 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 TUBGCP4Q9UGJ1 667 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 DIAPH2O60879 1101 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 LRCH4O75427 683 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 TAC1P20366 129 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 RNF180Q86T96 592 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 ADAM2Q99965 735 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 LPIN3Q9BQK8 851 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 WWP1Q9H0M0 922 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 KIF9Q9HAQ2 790 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 NRCAMQ92823 1304 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 MSCO60682 206 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 TRPA1O75762 1119 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 KDSRQ06136 332 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 SLC12A1Q13621 1099 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 PPP1R26Q5T8A7 1209 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 LRRC38Q5VT99 294 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 KCNT2Q6UVM3 1135 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 C4orf22Q6V702 233 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 SKA2Q8WVK7 121 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 LPPQ93052 612 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 TBCBQ99426 244 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 SHCBP1LQ9BZQ2 653 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 XAB2Q9HCS7 855 aaKnown RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 PMLP29590 882 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 ATN1P54259 1190 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 DRG2P55039 364 aaKnown RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 MBTD1Q05BQ5 628 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 SREBF2Q12772 1141 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 MMRN1Q13201 1228 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 TAF5Q15542 800 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 FASTKD1Q53R41 847 aaKnown RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 UNC45BQ8IWX7 931 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 PGLYRP2Q96PD5 576 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 MINDY3Q9H8M7 445 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 SMIM28A0A1B0GU29 152 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 ERBB2P04626 1255 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 PTPN1P18031 435 aaKnown RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 TPD52P55327 224 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 C10orf120Q5SQS8 335 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 TRIM62Q9BVG3 475 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 SARS2Q9NP81 518 aaKnown RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 TRPV2Q9Y5S1 764 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 FOXO6A8MYZ6 492 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 PMPCBO75439 489 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 ODC1P11926 461 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 CHI3L2Q15782 390 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 MAP3K21Q5TCX8 1036 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 DDX27Q96GQ7 796 aaKnown RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 FBXL18Q96ME1 805 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 SLC39A10Q9ULF5 831 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 C2CD2Q9Y426 696 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 ABCG1P45844 678 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 CPA2P48052 419 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 ALDH18A1P54886 795 aaKnown RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 ADIGQ0VDE8 80 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 FAAP100Q0VG06 881 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 NAPEPLDQ6IQ20 393 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 NT5DC4Q86YG4 428 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 ZC3H3Q8IXZ2 948 aaKnown RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 SENP8Q96LD8 212 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 STXBP5LQ9Y2K9 1186 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 GOLGA8CPA6NN73 597 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 GMNNO75496 209 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 C22orf31O95567 290 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 ADRA1DP25100 572 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 PEX5P50542 639 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 PTPRN2Q92932 1015 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 ALKBH8Q96BT7 664 aaKnown RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 FAM167BQ9BTA0 163 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 FRMD8Q9BZ67 464 aaPredicted RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 NOP53Q9NZM5 478 aaKnown RBP6.41□□□□□ -1.38
PRKDC-201ENST00000314191 SHOC2Q9UQ13 582 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 ROBO1Q9Y6N7 1651 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 B4GALT4O60513 344 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 AXLP30530 894 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 XYLT1Q86Y38 959 aa6.41□□□□□ -1.38
PRKDC-201ENST00000314191 LMO3Q8TAP4 145 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms