RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 PALLDQ8WX93 1383 aa15.96■□□□□ 0.14
HCFC1-201ENST00000310441 OVOS2A0A0G2JMS6 1433 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 OVOS2A0A0J9YW53 1432 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 OVOS2Q6IE36 1432 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 NAA20P61599 178 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 PDIA6Q15084 440 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 ARID3BQ8IVW6 561 aaPredicted RBP15.95■□□□□ 0.14
HCFC1-201ENST00000310441 CCDC3Q9BQI4 270 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 TMEM79Q9BSE2 394 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 RAVER2Q9HCJ3 691 aaKnown RBP15.95■□□□□ 0.14
HCFC1-201ENST00000310441 SNX13Q9Y5W8 968 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 RGS20O76081 388 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 TPBGLP0DKB5 382 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 EPB42P16452 691 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 CCNA2P20248 432 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 RAET1EQ8TD07 263 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 TMCO1Q9UM00 188 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 PNPLA7Q6ZV29 1317 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 TMEM253P0C7T8 217 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 DPYDQ12882 1025 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 LPCAT2Q7L5N7 544 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 HPDLQ96IR7 371 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 C9orf16Q9BUW7 83 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 VCPKMTQ9H867 229 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 A0A088AWK7 358 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 MPOP05164 745 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 ZNF10P21506 573 aaPredicted RBP15.95■□□□□ 0.14
HCFC1-201ENST00000310441 RAB2AP61019 212 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 MAPK7Q13164 816 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 PTGISQ16647 500 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 C11orf96Q7Z7L8 435 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 VMP1Q96GC9 406 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 LBHD1Q9BQE6 289 aaPredicted RBP15.95■□□□□ 0.14
HCFC1-201ENST00000310441 PCDHGA4Q9Y5G9 962 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 MYL12BO14950 172 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 ECE2O60344 883 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 ZNF682O95780 498 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 EIF2B2P49770 351 aaKnown RBP15.95■□□□□ 0.14
HCFC1-201ENST00000310441 CHAMP1Q96JM3 812 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 PPP1R10Q96QC0 940 aaKnown RBP15.95■□□□□ 0.14
HCFC1-201ENST00000310441 ARIH1Q9Y4X5 557 aaPredicted RBP15.95■□□□□ 0.14
HCFC1-201ENST00000310441 SNX9Q9Y5X1 595 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 C19orf81C9J6K1 198 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 ZCCHC2Q9C0B9 1178 aaKnown RBP15.95■□□□□ 0.14
HCFC1-201ENST00000310441 C6orf62Q9GZU0 229 aaPredicted RBP15.95■□□□□ 0.14
HCFC1-201ENST00000310441 GSTK1Q9Y2Q3 226 aa15.95■□□□□ 0.14
HCFC1-201ENST00000310441 CYP2D6P10635 497 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 HIRAP54198 1017 aaPredicted RBP15.94■□□□□ 0.14
HCFC1-201ENST00000310441 TMEM26Q6ZUK4 368 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 DCP1AQ9NPI6 582 aaPredicted RBP15.94■□□□□ 0.14
HCFC1-201ENST00000310441 LRCH1Q9Y2L9 728 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 V9GYQ6 96 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 C15orf38-AP3S2A0A0A6YYH1 394 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 ANKRD65E5RJM6 399 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 PSMD4P55036 377 aaKnown RBP15.94■□□□□ 0.14
HCFC1-201ENST00000310441 DGKKQ5KSL6 1271 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 MROH9Q5TGP6 573 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 MZT2AQ6P582 158 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 ZBTB49Q6ZSB9 765 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 ARPINQ7Z6K5 226 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.94■□□□□ 0.141e-8■■■□□ 15
HCFC1-201ENST00000310441 OXCT1P55809 520 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 SF3B3Q15393 1217 aaKnown RBP15.94■□□□□ 0.14
HCFC1-201ENST00000310441 SLC30A5Q8TAD4 765 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 WDCPQ9H6R7 721 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.94■□□□□ 0.14
HCFC1-201ENST00000310441 NR2C2P49116 596 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 ZNF177Q13360 481 aaPredicted RBP15.94■□□□□ 0.14
HCFC1-201ENST00000310441 TSGA10IPQ3SY00 556 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 TYW3Q6IPR3 259 aaKnown RBP15.94■□□□□ 0.14
HCFC1-201ENST00000310441 IZUMO1Q8IYV9 350 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 CCDC33Q8N5R6 958 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 CORO2BQ9UQ03 480 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 CAMK1DQ8IU85 385 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 DGKIO75912 1065 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 ACADLP28330 430 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 SLC29A2Q14542 456 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 TMEM132CQ8N3T6 1108 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 AADATQ8N5Z0 425 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 ZNF518BQ9C0D4 1074 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 RAD18Q9NS91 495 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 IFRD1O00458 451 aaPredicted RBP15.94■□□□□ 0.14
HCFC1-201ENST00000310441 FBXO21O94952 628 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 RBP3P10745 1247 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 PIK3CGP48736 1102 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 DGKDQ16760 1214 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 QRICH1Q2TAL8 776 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 AIFM3Q96NN9 605 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 SEPT5Q99719 369 aaPredicted RBP15.94■□□□□ 0.14
HCFC1-201ENST00000310441 ELOVL6Q9H5J4 265 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 NMRK2Q9NPI5 230 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 RBM12Q9NTZ6 932 aaKnown RBP15.94■□□□□ 0.14
HCFC1-201ENST00000310441 SH3GLB1Q9Y371 365 aa15.94■□□□□ 0.14
HCFC1-201ENST00000310441 ZMYM2Q9UBW7 1377 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 NDUFB5O43674 189 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 ARHGDIBP52566 201 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 PWP1Q13610 501 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 OASLQ15646 514 aaKnown RBP15.93■□□□□ 0.14
HCFC1-201ENST00000310441 ALG11Q2TAA5 492 aa15.93■□□□□ 0.14
HCFC1-201ENST00000310441 TRMT2AQ8IZ69 625 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms