RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 VEPH1Q14D04 833 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 ZNF280CQ8ND82 737 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 COPG2Q9UBF2 871 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 CAB39Q9Y376 341 aaPredicted RBP13.58□□□□□ -0.24
SNED1-201ENST00000310397 TPST1O60507 370 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 NCAM1P13591 858 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 PRKAA1Q13131 559 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 CCDC81Q6ZN84 652 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 PLEKHM3Q6ZWE6 761 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 ERO1BQ86YB8 467 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 PLEKHA8Q96JA3 519 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 BBS2Q9BXC9 721 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 KCTD10Q9H3F6 313 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 EXOSC4Q9NPD3 245 aaKnown RBP13.58□□□□□ -0.24
SNED1-201ENST00000310397 PIM2Q9P1W9 311 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 PRPF4O43172 522 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNED1-201ENST00000310397 ST3GAL1Q11201 340 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 AARS2Q5JTZ9 985 aaKnown RBP13.58□□□□□ -0.24
SNED1-201ENST00000310397 DIS3LQ8TF46 1054 aaKnown RBP13.58□□□□□ -0.24
SNED1-201ENST00000310397 SH3GL2Q99962 352 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 AVENQ9NQS1 362 aaPredicted RBP13.58□□□□□ -0.24
SNED1-201ENST00000310397 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.58□□□□□ -0.24
SNED1-201ENST00000310397 NTSR2O95665 410 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 SLC2A3P11169 496 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 PPIDQ08752 370 aaKnown RBP13.58□□□□□ -0.24
SNED1-201ENST00000310397 MPP3Q13368 585 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 CBWD2Q8IUF1 395 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 RMND5BQ96G75 393 aaPredicted RBP13.58□□□□□ -0.24
SNED1-201ENST00000310397 RAD54BQ9Y620 910 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 HEATR9A2RTY3 570 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 IQCA1LA6NCM1 817 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 TTKP33981 857 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 LRRC74AQ0VAA2 488 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 LUZP2Q86TE4 346 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 OTULINQ96BN8 352 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 EIF3LQ9Y262 564 aaKnown RBP13.58□□□□□ -0.24
SNED1-201ENST00000310397 MYRFQ9Y2G1 1151 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 KRT87PA6NCN2 255 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 RGS5O15539 181 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 VDRP11473 427 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 ALADP13716 330 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 MLH1P40692 756 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNED1-201ENST00000310397 CYP24A1Q07973 514 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 NOTUMQ6P988 496 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 UBA3Q8TBC4 463 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 GDPD5Q8WTR4 605 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 SLC20A1Q8WUM9 679 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 ATAD3AQ9NVI7 634 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 CTNNAL1Q9UBT7 734 aa13.58□□□□□ -0.24
SNED1-201ENST00000310397 CDK16Q00536 496 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 NKX1-1Q15270 411 aaPredicted RBP13.57□□□□□ -0.24
SNED1-201ENST00000310397 TIGD7Q6NT04 549 aaPredicted RBP13.57□□□□□ -0.24
SNED1-201ENST00000310397 PKN3Q6P5Z2 889 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNED1-201ENST00000310397 WDCPQ9H6R7 721 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 H2AFY2Q9P0M6 372 aaPredicted RBP13.57□□□□□ -0.24
SNED1-201ENST00000310397 TSR3Q9UJK0 312 aaKnown RBP13.57□□□□□ -0.24
SNED1-201ENST00000310397 ICAM1P05362 532 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 DDR1Q08345 913 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 ARMCX4Q5H9R4 360 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 SH3KBP1Q96B97 665 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 HES6Q96HZ4 224 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 E9PBE3 544 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 KLHL41O60662 606 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 LAMC2Q13753 1193 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 MAPRE1Q15691 268 aaKnown RBP13.57□□□□□ -0.24
SNED1-201ENST00000310397 MCOLN2Q8IZK6 566 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 NMRK1Q9NWW6 199 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 SNTNA6NMZ2 147 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 RNF103O00237 685 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 F9P00740 461 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 MGAT5Q09328 741 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 TBC1D19Q8N5T2 526 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 OR6Y1Q8NGX8 325 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 ACOT9Q9Y305 439 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 SKAP2O75563 359 aaPredicted RBP13.57□□□□□ -0.24
SNED1-201ENST00000310397 ARIH2O95376 493 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 ITGB3P05106 788 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 ACAP1Q15027 740 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 TTLL9Q3SXZ7 439 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 B3GNT6Q6ZMB0 384 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 ANKS3Q6ZW76 656 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 SH3RF1Q7Z6J0 888 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 SLFN11Q7Z7L1 901 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 PRKCIP41743 596 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 DENND5BQ6ZUT9 1274 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 GMCL1Q96IK5 515 aa13.57□□□□□ -0.24
SNED1-201ENST00000310397 CYP3A43Q9HB55 503 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 TRMT6Q9UJA5 497 aaKnown RBP13.56□□□□□ -0.24
SNED1-201ENST00000310397 SPDYE5A6NIY4 337 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 PGK2P07205 417 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 MYL4P12829 197 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 NPTX2P47972 431 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 GEMP55040 296 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 GCNT1Q02742 428 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 PKN2Q16513 984 aaKnown RBP13.56□□□□□ -0.24
SNED1-201ENST00000310397 DCAF4L1Q3SXM0 396 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 SPDYE7PQ495Y7 208 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 ABRAQ8N0Z2 381 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms