RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 DSG1Q02413 1049 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 ACAP1Q15027 740 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 CNGA3Q16281 694 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 JADE1Q6IE81 842 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 PIWIL1Q96J94 861 aaKnown RBP13.16□□□□□ -0.3
RETREG3-201ENST00000309428 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
RETREG3-201ENST00000309428 NUF2Q9BZD4 464 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 SETD4Q9NVD3 440 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 IP6K2Q9UHH9 426 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 LACTBL1A8MY62 500 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 CASQ2O14958 399 aaPredicted RBP13.16□□□□□ -0.3
RETREG3-201ENST00000309428 DYNC1LI2O43237 492 aaPredicted RBP13.16□□□□□ -0.3
RETREG3-201ENST00000309428 PSMG1O95456 288 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 C4BPAP04003 597 aaKnown RBP13.16□□□□□ -0.3
RETREG3-201ENST00000309428 RARBP10826 455 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 ACADSP16219 412 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 SLC25A3Q00325 362 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 PTPN20Q4JDL3 420 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 MCUQ8NE86 351 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 MAGEC3Q8TD91 643 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 CPXM1Q96SM3 734 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 SCINQ9Y6U3 715 aa13.16□□□□□ -0.3
RETREG3-201ENST00000309428 P4HA2O15460 535 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 STAG3L1P0CL83 205 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 ENO3P13929 434 aaPredicted RBP13.15□□□□□ -0.3
RETREG3-201ENST00000309428 ROR2Q01974 943 aaKnown RBP13.15□□□□□ -0.3
RETREG3-201ENST00000309428 SPOCD1Q6ZMY3 1216 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 MFSD14AQ96MC6 490 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 OSMRQ99650 979 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 ARHGEF3Q9NR81 526 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 CCDC189A1A4V9 331 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 GARTP22102 1010 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 NAMPTP43490 491 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 TUBP50607 506 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 ZNF200P98182 395 aaPredicted RBP13.15□□□□□ -0.3
RETREG3-201ENST00000309428 ZC3H12AQ5D1E8 599 aaKnown RBP13.15□□□□□ -0.3
RETREG3-201ENST00000309428 POLNQ7Z5Q5 900 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 LCA5Q86VQ0 697 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 TMC2Q8TDI7 906 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 DDX1Q92499 740 aaKnown RBP13.15□□□□□ -0.3
RETREG3-201ENST00000309428 GCNAQ96QF7 691 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 CGRRF1Q99675 332 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 ZNF184Q99676 751 aaPredicted RBP13.15□□□□□ -0.3
RETREG3-201ENST00000309428 APOL2Q9BQE5 337 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 WWP1Q9H0M0 922 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 ADAM7Q9H2U9 754 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 SENP1Q9P0U3 644 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 ARHGAP28Q9P2N2 729 aa13.15□□□□□ -0.3
RETREG3-201ENST00000309428 SBF2Q86WG5 1849 aa13.15□□□□□ -0.31
RETREG3-201ENST00000309428 BTNL10A8MVZ5 291 aa13.15□□□□□ -0.31
RETREG3-201ENST00000309428 PEX11AO75192 247 aa13.15□□□□□ -0.31
RETREG3-201ENST00000309428 NPM3O75607 178 aaKnown RBP13.15□□□□□ -0.31
RETREG3-201ENST00000309428 FARP2O94887 1054 aaPredicted RBP13.15□□□□□ -0.31
RETREG3-201ENST00000309428 LDHAP00338 332 aaKnown RBP13.15□□□□□ -0.31
RETREG3-201ENST00000309428 CTU1Q7Z7A3 348 aaKnown RBP13.15□□□□□ -0.31
RETREG3-201ENST00000309428 E2F7Q96AV8 911 aa13.15□□□□□ -0.31
RETREG3-201ENST00000309428 HPDLQ96IR7 371 aa13.15□□□□□ -0.31
RETREG3-201ENST00000309428 ZC3H7BQ9UGR2 993 aaKnown RBP13.15□□□□□ -0.31
RETREG3-201ENST00000309428 GOLGA8QA0A0J9YX86 632 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 A0A1B0GVG6 124 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 TCRBV7S3A2A0A539 114 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 GOLGA8OA6NCC3 632 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 GOLGA8NF8WBI6 632 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 OGTO15294 1046 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 TBC1D12O60347 775 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 HSPA4LO95757 839 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 LINGO3P0C6S8 592 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 FDX1P10109 184 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 NELFEP18615 380 aaKnown RBP13.14□□□□□ -0.31
RETREG3-201ENST00000309428 HMGB2P26583 209 aaKnown RBP13.14□□□□□ -0.31
RETREG3-201ENST00000309428 GTF2A2P52657 109 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 TPD52P55327 224 aaPredicted RBP13.14□□□□□ -0.31
RETREG3-201ENST00000309428 POU5F1Q01860 360 aaKnown RBP13.14□□□□□ -0.31
RETREG3-201ENST00000309428 GCNT1Q02742 428 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 MCL1Q07820 350 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 FAAP100Q0VG06 881 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 STX3Q13277 289 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 CLNKQ7Z7G1 428 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 UNC45BQ8IWX7 931 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 HASPINQ8TF76 798 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 MPP4Q96JB8 637 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 MED10Q9BTT4 135 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 SPATA31C2B4DYI2 1134 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 E5RJQ4 531 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 CCNFP41002 786 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 ABL2P42684 1182 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 PDCD2Q16342 344 aaPredicted RBP13.14□□□□□ -0.31
RETREG3-201ENST00000309428 C16orf46Q6P387 395 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 B3GNT9Q6UX72 402 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 APOBEC3FQ8IUX4 373 aaKnown RBP13.14□□□□□ -0.31
RETREG3-201ENST00000309428 SAMD3Q8N6K7 520 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 MAB21L3Q8N8X9 362 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 RNF34Q969K3 372 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 SLC10A4Q96EP9 437 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 DNAJC1Q96KC8 554 aaKnown RBP13.14□□□□□ -0.31
RETREG3-201ENST00000309428 Q9H521 79 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 ADA2Q9NZK5 511 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 A8MXQ7 604 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 GPR25O00155 361 aa13.14□□□□□ -0.31
RETREG3-201ENST00000309428 DRG2P55039 364 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms