RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 ZDHHC14Q8IZN3 488 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 MMGT1Q8N4V1 131 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 IGSF21Q96ID5 467 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 AP1M1Q9BXS5 423 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 ULBP1Q9BZM6 244 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 ANKZF1Q9H8Y5 726 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 KLHL11Q9NVR0 708 aa7.3□□□□□ -1.24
PTCD2-201ENST00000308077 MRPL42Q9Y6G3 142 aaKnown RBP7.3□□□□□ -1.24
PTCD2-201ENST00000308077 VNN2O95498 520 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 RHOXF2BP0C7M4 288 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 ALDH7A1P49419 539 aaKnown RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 DAOAP59103 153 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 MRPS25P82663 173 aaKnown RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 ELAVL2Q12926 359 aaKnown RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 PPIGQ13427 754 aaKnown RBP eCLIP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 LLGL1Q15334 1064 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 SIX1Q15475 284 aaPredicted RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 MAPRE1Q15691 268 aaKnown RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 SEL1L2Q5TEA6 688 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 LRRC38Q5VT99 294 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 ZNF280DQ6N043 979 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 KCNT2Q6UVM3 1135 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 PRSS55Q6UWB4 352 aaPredicted RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 CYP4V2Q6ZWL3 525 aaPredicted RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 BHLHA9Q7RTU4 235 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 ADAT2Q7Z6V5 191 aaKnown RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 SPATA2LQ8IUW3 424 aaPredicted RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 CMTR2Q8IYT2 770 aaKnown RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 KATNAL2Q8IYT4 538 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 ACSF2Q96CM8 615 aaPredicted RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 NECAB3Q96P71 396 aaPredicted RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 PEBP4Q96S96 227 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 PRRX2Q99811 253 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 RHOXF2Q9BQY4 288 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 CNPY3Q9BT09 278 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 TTPALQ9BTX7 342 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 C11orf84Q9BUA3 381 aaPredicted RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 UBXN6Q9BZV1 441 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 UBE2OQ9C0C9 1292 aaKnown RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 LRRC4Q9HBW1 653 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 DMAP1Q9NPF5 467 aaPredicted RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 CXXC1Q9P0U4 656 aaPredicted RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 CALCOCO1Q9P1Z2 691 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 PLXNA3P51805 1871 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 ZBBXA8MT70 800 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 KRIT1O00522 736 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 DAB1O75553 588 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 USP17L7P0C7H9 530 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 SYN1P17600 705 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 MIPP30301 263 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 GPR15P49685 360 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 PITX1P78337 314 aaPredicted RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 ATP11AP98196 1134 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 FPGSQ05932 587 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 BTG3Q14201 252 aaPredicted RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 CDO1Q16878 200 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 LONRF2Q1L5Z9 754 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 SMTNL2Q2TAL5 461 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 TMEM240Q5SV17 173 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 OTUD1Q5VV17 481 aaPredicted RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 C4orf50Q6ZRC1 276 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 ARCQ7LC44 396 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 SLC13A5Q86YT5 568 aaPredicted RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 DCP1BQ8IZD4 617 aaKnown RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 SIX6OS1Q8N1H7 587 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 SLC39A11Q8N1S5 342 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 TTC9BQ8N6N2 239 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 COLGALT1Q8NBJ5 622 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 STKLD1Q8NE28 680 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 EXD1Q8NHP7 514 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 RAPGEF5Q92565 580 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 PGLYRP2Q96PD5 576 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 PNKPQ96T60 521 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 LRRC1Q9BTT6 524 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 DDX23Q9BUQ8 820 aaKnown RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 ZWILCHQ9H900 591 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 ASNSD1Q9NWL6 643 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 ABI2Q9NYB9 513 aaPredicted RBP7.29□□□□□ -1.24
PTCD2-201ENST00000308077 PRKAG2Q9UGJ0 569 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 PCSK1NQ9UHG2 260 aa7.29□□□□□ -1.24
PTCD2-201ENST00000308077 GREB1Q4ZG55 1949 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 OR6C75A6NL08 312 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 C3orf70A6NLC5 250 aaPredicted RBP7.28□□□□□ -1.24
PTCD2-201ENST00000308077 YJEFN3A6XGL0 299 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 E7ENQ6 273 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 TNFRSF10BO14763 440 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 FSCN2O14926 492 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 ADAM12O43184 909 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 HSF2BPO75031 334 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 FBXO21O94952 628 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 TRUB2O95900 331 aaKnown RBP7.28□□□□□ -1.24
PTCD2-201ENST00000308077 FGBP02675 491 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 KRT1P04264 644 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 FYNP06241 537 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 LINC00271P0C7V0 271 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 SDC4P31431 198 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 PCK1P35558 622 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 PTPN9P43378 593 aa7.28□□□□□ -1.24
PTCD2-201ENST00000308077 ATXN1P54253 815 aaKnown RBP7.28□□□□□ -1.24
PTCD2-201ENST00000308077 HDAC4P56524 1084 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms