RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 DCAKDQ8WVC6 231 aa17.12■□□□□ 0.33
SYVN1-202ENST00000307289 PCDH18Q9HCL0 1135 aa17.12■□□□□ 0.33
SYVN1-202ENST00000307289 PHTF1Q9UMS5 762 aa17.12■□□□□ 0.33
SYVN1-202ENST00000307289 DNAJC8O75937 253 aaPredicted RBP17.11■□□□□ 0.33
SYVN1-202ENST00000307289 RECQL4O94761 1208 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 GRM5P41594 1212 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 GBE1Q04446 702 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 ACVR2BQ13705 512 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 KBTBD12Q3ZCT8 623 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 PPP1R21Q6ZMI0 780 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 MZB1Q8WU39 189 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 FAF2Q96CS3 445 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 CFAP36Q96G28 342 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 SGSM3Q96HU1 749 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 PIH1D1Q9NWS0 290 aaKnown RBP17.11■□□□□ 0.33
SYVN1-202ENST00000307289 ARL2BPQ9Y2Y0 163 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 ACTL7BQ9Y614 415 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 NUMBLQ9Y6R0 609 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 TCRBV9S1A1TA0A576 114 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 RBM47A0AV96 593 aaKnown RBP17.11■□□□□ 0.33
SYVN1-202ENST00000307289 A8MXQ7 604 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 UGT1A9O60656 530 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 GRIA1P42261 906 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 SOX4Q06945 474 aaPredicted RBP17.11■□□□□ 0.33
SYVN1-202ENST00000307289 OVGP1Q12889 678 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 GALNTL6Q49A17 601 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 DUSP28Q4G0W2 176 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 PDIK1LQ8N165 341 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 ATP11CQ8NB49 1132 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 DNAJB3Q8WWF6 145 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 SERAC1Q96JX3 654 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 UGT1A7Q9HAW7 530 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 UGT1A10Q9HAW8 530 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 UGT1A8Q9HAW9 530 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 SPON1Q9HCB6 807 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 YWHAGP61981 247 aaKnown RBP eCLIP17.11■□□□□ 0.33
SYVN1-202ENST00000307289 PITX1P78337 314 aaPredicted RBP17.11■□□□□ 0.33
SYVN1-202ENST00000307289 TCP10LQ8TDR4 215 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 PTPRN2Q92932 1015 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 SNX27Q96L92 541 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 ACSS3Q9H6R3 686 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 PLAC1Q9HBJ0 212 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 ETNK2Q9NVF9 386 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 SLC5A4Q9NY91 659 aa17.11■□□□□ 0.33
SYVN1-202ENST00000307289 CXorf49A8MYA2 514 aaPredicted RBP17.1■□□□□ 0.33
SYVN1-202ENST00000307289 E7ESA3 106 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 IGF2BP3O00425 579 aaKnown RBP eCLIP17.1■□□□□ 0.332e-7■□□□□ 8.8
SYVN1-202ENST00000307289 CCNA1P78396 465 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 SLC6A3Q01959 620 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 KCNJ11Q14654 390 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 SUGP1Q8IWZ8 645 aaKnown RBP17.1■□□□□ 0.33
SYVN1-202ENST00000307289 RIBC1Q8N443 379 aaPredicted RBP17.1■□□□□ 0.33
SYVN1-202ENST00000307289 CCDC185Q8N715 623 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 TINF2Q9BSI4 451 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 PLXNB2O15031 1838 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 SYNJ2BP-COX16A0A087WUM0 186 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 PRPF4O43172 522 aaKnown RBP eCLIP17.1■□□□□ 0.33
SYVN1-202ENST00000307289 APRTP07741 180 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 SDC4P31431 198 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 BCAR1P56945 870 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 RNASELQ05823 741 aaKnown RBP17.1■□□□□ 0.33
SYVN1-202ENST00000307289 FAAP100Q0VG06 881 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 E2F5Q15329 346 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 PCGF5Q86SE9 256 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 KBTBD7Q8WVZ9 684 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 EMID1Q96A84 441 aaPredicted RBP17.1■□□□□ 0.33
SYVN1-202ENST00000307289 SLC4A5Q9BY07 1137 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 COX16Q9P0S2 106 aa17.1■□□□□ 0.33
SYVN1-202ENST00000307289 SMIM10L2AP0DMW4 78 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 SMIM10L2BP0DMW5 78 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 SPARCL1Q14515 664 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 ZBTB6Q15916 424 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 DGKDQ16760 1214 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 C9orf57Q5W0N0 161 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 ADGRD1Q6QNK2 874 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 ARRDC4Q8NCT1 418 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 TBC1D31Q96DN5 1066 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 CEP41Q9BYV8 373 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 DHX35Q9H5Z1 703 aaKnown RBP17.09■□□□□ 0.33
SYVN1-202ENST00000307289 FLRT1Q9NZU1 646 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 BAIAP2L1Q9UHR4 511 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 STK38LQ9Y2H1 464 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 TRIP12Q14669 1992 aaPredicted RBP17.09■□□□□ 0.33
SYVN1-202ENST00000307289 METTL18O95568 372 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 KRT16P08779 473 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 TKTP29401 623 aaKnown RBP17.09■□□□□ 0.33
SYVN1-202ENST00000307289 MSH2P43246 934 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 BEX3Q00994 111 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 BNIP1Q12981 228 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 PLEKHG4Q58EX7 1191 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 TMEM110Q86TL2 294 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 MPP5Q8N3R9 675 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 PGLYRP2Q96PD5 576 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 DHRS4Q9BTZ2 278 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 MYLK2Q9H1R3 596 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 SLC24A2Q9UI40 661 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 PIN4Q9Y237 131 aaKnown RBP17.09■□□□□ 0.33
SYVN1-202ENST00000307289 TEX264Q9Y6I9 313 aa17.09■□□□□ 0.33
SYVN1-202ENST00000307289 MEIS3P2A8K0S8 358 aa17.08■□□□□ 0.33
SYVN1-202ENST00000307289 CLDN5O00501 218 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms