RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 DDX18Q9NVP1 670 aaKnown RBP13.26□□□□□ -0.29
COL3A1-201ENST00000304636 SORCS3Q9UPU3 1222 aa13.26□□□□□ -0.29
COL3A1-201ENST00000304636 MYRFQ9Y2G1 1151 aa13.26□□□□□ -0.29
COL3A1-201ENST00000304636 ACOT9Q9Y305 439 aa13.26□□□□□ -0.29
COL3A1-201ENST00000304636 MEI4A8MW99 385 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 RHOBTB1O94844 696 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 PRKAA2P54646 552 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 PRKAA1Q13131 559 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 CTNNAL1Q9UBT7 734 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 VWDEQ8N2E2 1590 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 KLRC4O43908 158 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 MLH1P40692 756 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 TAF2Q6P1X5 1199 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 THUMPD3Q9BV44 507 aaKnown RBP13.25□□□□□ -0.29
COL3A1-201ENST00000304636 TBC1D10AQ9BXI6 508 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 VPS9D1Q9Y2B5 631 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 KBTBD13C9JR72 458 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 LIN7AO14910 233 aaPredicted RBP13.25□□□□□ -0.29
COL3A1-201ENST00000304636 SERPINI2O75830 405 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 RBP1P09455 135 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 GSTT1P30711 240 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 SKIV2L2P42285 1042 aaKnown RBP13.25□□□□□ -0.29
COL3A1-201ENST00000304636 RAD51Q06609 339 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 MMRN1Q13201 1228 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 USP13Q92995 863 aaPredicted RBP13.25□□□□□ -0.29
COL3A1-201ENST00000304636 SH3GL2Q99962 352 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 CHST7Q9NS84 486 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 MCM8Q9UJA3 840 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 MAP2P11137 1827 aaKnown RBP13.25□□□□□ -0.29
COL3A1-201ENST00000304636 CDC25CP30307 473 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 GLRBP48167 497 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 ROR2Q01974 943 aaKnown RBP13.25□□□□□ -0.29
COL3A1-201ENST00000304636 NFYCQ13952 458 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 DUPD1Q68J44 220 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 WDR49Q8IV35 697 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 C4orf19Q8IY42 314 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 KATNAL2Q8IYT4 538 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 BAP1Q92560 729 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 ART4Q93070 314 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 DDX50Q9BQ39 737 aaKnown RBP13.25□□□□□ -0.29
COL3A1-201ENST00000304636 IL17RBQ9NRM6 502 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 CDV3Q9UKY7 258 aaKnown RBP13.25□□□□□ -0.29
COL3A1-201ENST00000304636 NCANO14594 1321 aa13.25□□□□□ -0.29
COL3A1-201ENST00000304636 UBDO15205 165 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 MAP3K6O95382 1288 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 ATP6V1C1P21283 382 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 FASP25445 335 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 ADARP55265 1226 aaKnown RBP13.24□□□□□ -0.29
COL3A1-201ENST00000304636 MPP3Q13368 585 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 C16orf72Q14CZ0 275 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 TJAP1Q5JTD0 557 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 TBCELQ5QJ74 424 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 B3GNT6Q6ZMB0 384 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 IQCKQ8N0W5 287 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 GMCL1Q96IK5 515 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 CISHQ9NSE2 258 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 ZNF70Q9UC06 446 aaPredicted RBP13.24□□□□□ -0.29
COL3A1-201ENST00000304636 EIF3LQ9Y262 564 aaKnown RBP13.24□□□□□ -0.29
COL3A1-201ENST00000304636 WFS1O76024 890 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 ABHD2P08910 425 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 PNPLA4P41247 253 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 CACNB2Q08289 660 aaPredicted RBP13.24□□□□□ -0.29
COL3A1-201ENST00000304636 GSTA3Q16772 222 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 GRTP1Q5TC63 336 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 EFCAB12Q6NXP0 572 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 CROCCP3Q8IVE0 287 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 EFHBQ8N7U6 833 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 MAGEC3Q8TD91 643 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 BBS2Q9BXC9 721 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 LATS2Q9NRM7 1088 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 PIM2Q9P1W9 311 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 DNPEPQ9ULA0 475 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 TRDMT1O14717 391 aaKnown RBP13.24□□□□□ -0.29
COL3A1-201ENST00000304636 TOMM70O94826 608 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 BCL10O95999 233 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 NCAM1P13591 858 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 ME2P23368 584 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 SOX6P35712 828 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 LRRC71Q8N4P6 559 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 GMCL1P1Q8NEA9 526 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 DCUN1D1Q96GG9 259 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 COPG2Q9UBF2 871 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 M0QYT0 321 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 HBP1O60381 514 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 ITGA9Q13797 1035 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 DCAF4L1Q3SXM0 396 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 KYAT3Q6YP21 454 aaKnown RBP13.24□□□□□ -0.29
COL3A1-201ENST00000304636 LRRC8DQ7L1W4 858 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 DPP3Q9NY33 737 aa13.24□□□□□ -0.29
COL3A1-201ENST00000304636 REXO2Q9Y3B8 237 aaKnown RBP13.24□□□□□ -0.29
COL3A1-201ENST00000304636 MAGEB16A2A368 324 aa13.23□□□□□ -0.29
COL3A1-201ENST00000304636 KPNA4O00629 521 aaPredicted RBP13.23□□□□□ -0.29
COL3A1-201ENST00000304636 SHOX2O60902 331 aaPredicted RBP13.23□□□□□ -0.29
COL3A1-201ENST00000304636 SLC12A3P55017 1021 aa13.23□□□□□ -0.29
COL3A1-201ENST00000304636 FAAP100Q0VG06 881 aa13.23□□□□□ -0.29
COL3A1-201ENST00000304636 DCTN2Q13561 401 aaKnown RBP13.23□□□□□ -0.29
COL3A1-201ENST00000304636 MRNIPQ6NTE8 343 aa13.23□□□□□ -0.29
COL3A1-201ENST00000304636 PRMT9Q6P2P2 845 aa13.23□□□□□ -0.29
COL3A1-201ENST00000304636 LRRC55Q6ZSA7 311 aa13.23□□□□□ -0.29
COL3A1-201ENST00000304636 BBS7Q8IWZ6 715 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms