RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 DRG1Q9Y295 367 aaKnown RBP11.4□□□□□ -0.58
SNX20-201ENST00000300590 GMEB1Q9Y692 573 aa11.4□□□□□ -0.58
SNX20-201ENST00000300590 PIK3R2O00459 728 aa11.4□□□□□ -0.59
SNX20-201ENST00000300590 NOP56O00567 594 aaKnown RBP11.4□□□□□ -0.59
SNX20-201ENST00000300590 STAMBPO95630 424 aa11.4□□□□□ -0.59
SNX20-201ENST00000300590 CRTAMO95727 393 aa11.4□□□□□ -0.59
SNX20-201ENST00000300590 SNRPAP09012 282 aaKnown RBP11.4□□□□□ -0.59
SNX20-201ENST00000300590 RBP3P10745 1247 aa11.4□□□□□ -0.59
SNX20-201ENST00000300590 EIF4BP23588 611 aaKnown RBP11.4□□□□□ -0.59
SNX20-201ENST00000300590 RARRES1P49788 294 aa11.4□□□□□ -0.59
SNX20-201ENST00000300590 SLC18A2Q05940 514 aa11.4□□□□□ -0.59
SNX20-201ENST00000300590 MYBPC2Q14324 1141 aa11.4□□□□□ -0.59
SNX20-201ENST00000300590 NPNTQ6UXI9 565 aa11.4□□□□□ -0.59
SNX20-201ENST00000300590 KYAT3Q6YP21 454 aaKnown RBP11.4□□□□□ -0.59
SNX20-201ENST00000300590 HSPH1Q92598 858 aa11.4□□□□□ -0.59
SNX20-201ENST00000300590 FAF2Q96CS3 445 aa11.4□□□□□ -0.59
SNX20-201ENST00000300590 POLLQ9UGP5 575 aa11.4□□□□□ -0.59
SNX20-201ENST00000300590 TCEAL9Q9UHQ7 104 aa11.4□□□□□ -0.59
SNX20-201ENST00000300590 PRR12Q9ULL5 1215 aa11.4□□□□□ -0.59
SNX20-201ENST00000300590 A0A0B4J269 797 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 ARHGAP10A1A4S6 786 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 STRNO43815 780 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 HLA-DRAP01903 254 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 ITGAVP06756 1048 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 PAX3P23760 479 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 CDKN2BP42772 138 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 HDAC4P56524 1084 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 EIF3EP60228 445 aaKnown RBP11.39□□□□□ -0.59
SNX20-201ENST00000300590 SP4Q02446 784 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 NRF1Q16656 503 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 MAP7D1Q3KQU3 841 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 CCDC92Q53HC0 331 aaPredicted RBP11.39□□□□□ -0.59
SNX20-201ENST00000300590 TTC39BQ5VTQ0 682 aaPredicted RBP11.39□□□□□ -0.59
SNX20-201ENST00000300590 SCARA3Q6AZY7 606 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 CDC42EP5Q6NZY7 148 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 FRMD7Q6ZUT3 714 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 SLC26A11Q86WA9 606 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 SIAH1Q8IUQ4 282 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 PHTF2Q8N3S3 785 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 DCAF4Q8WV16 495 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 ZNF516Q92618 1163 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 DCUN1D5Q9BTE7 237 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 WDR11Q9BZH6 1224 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 ACSS2Q9NR19 701 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 ZNF180Q9UJW8 692 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 SH3GLB1Q9Y371 365 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 SCINQ9Y6U3 715 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 ZNF335Q9H4Z2 1342 aaPredicted RBP11.39□□□□□ -0.59
SNX20-201ENST00000300590 DDTLA6NHG4 134 aaPredicted RBP11.39□□□□□ -0.59
SNX20-201ENST00000300590 E9PBE3 544 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 KLHL41O60662 606 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 SIN3BO75182 1162 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 CD1EP15812 388 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 MYBPC1Q00872 1141 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 ZNF252P-AS1Q0IIN9 211 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 PDE1CQ14123 709 aaPredicted RBP11.39□□□□□ -0.59
SNX20-201ENST00000300590 CCDC142Q17RM4 750 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 SEZ6Q53EL9 994 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 DARS2Q6PI48 645 aaKnown RBP11.39□□□□□ -0.59
SNX20-201ENST00000300590 ABRAQ8N0Z2 381 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 GRIN3AQ8TCU5 1115 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 C7orf26Q96N11 449 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 SLC9A2Q9UBY0 812 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 TBX20Q9UMR3 447 aa11.39□□□□□ -0.59
SNX20-201ENST00000300590 GNEQ9Y223 722 aaKnown RBP11.39□□□□□ -0.59
SNX20-201ENST00000300590 SDR42E2A6NKP2 422 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 G3V3G9 751 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 VIL1P09327 827 aaKnown RBP11.38□□□□□ -0.59
SNX20-201ENST00000300590 ECE1P42892 770 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 HSPA2P54652 639 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 EMP3P54852 163 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 PKNOX1P55347 436 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 NAA20P61599 178 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 CYP24A1Q07973 514 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 TAF5Q15542 800 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 FASTKD1Q53R41 847 aaKnown RBP11.38□□□□□ -0.59
SNX20-201ENST00000300590 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 PLEKHA7Q6IQ23 1121 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 DNAJC14Q6Y2X3 702 aaPredicted RBP11.38□□□□□ -0.59
SNX20-201ENST00000300590 PTAR1Q7Z6K3 402 aaPredicted RBP11.38□□□□□ -0.59
SNX20-201ENST00000300590 AMIGO3Q86WK7 504 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 CCDC33Q8N5R6 958 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 EMC1Q8N766 993 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 USP13Q92995 863 aaPredicted RBP11.38□□□□□ -0.59
SNX20-201ENST00000300590 TEKT1Q969V4 418 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 Q9H521 79 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 RAB6BQ9NRW1 208 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 ZC3H7BQ9UGR2 993 aaKnown RBP11.38□□□□□ -0.59
SNX20-201ENST00000300590 GAKO14976 1311 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 ZNF536O15090 1300 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 TAF1LQ8IZX4 1826 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 MYH9P35579 1960 aaKnown RBP11.38□□□□□ -0.59
SNX20-201ENST00000300590 PLIN4Q96Q06 1357 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 PDGFRBP09619 1106 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 CA8P35219 290 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 SNAPC2Q13487 334 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 DPYSL3Q14195 570 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 ITPRIPL1Q6GPH6 555 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 TATDN1Q6P1N9 297 aa11.38□□□□□ -0.59
SNX20-201ENST00000300590 PQLC1Q8N2U9 271 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms