RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 WARSP23381 471 aaKnown RBP8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 FPGSQ05932 587 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 ATG16L1Q676U5 607 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 POLNQ7Z5Q5 900 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 TSPAN17Q96FV3 270 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 XPO6Q96QU8 1125 aaKnown RBP8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 COMMD8Q9NX08 183 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 KLHL14Q9P2G3 628 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 STYXL1Q9Y6J8 313 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 A0A1W2PQ45 241 aaPredicted RBP8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 A0A1W2PQY0 241 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 BNIP3LO60238 219 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 ACAT1P24752 427 aaKnown RBP8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 ATP5C1P36542 298 aaKnown RBP8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 PBX1P40424 430 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 CDH8P55286 799 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 CASP8Q14790 479 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 TMED2Q15363 201 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 HECTD3Q5T447 861 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 TTC23LQ6PF05 361 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 ECHDC2Q86YB7 292 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 DAW1Q8N136 415 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 RIBC1Q8N443 379 aaPredicted RBP8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 TRIB2Q92519 343 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 FUBP3Q96I24 572 aaKnown RBP eCLIP8.63□□□□□ -1.032e-10■□□□□ 10
SNRPD1-201ENST00000300413 SRPK1Q96SB4 655 aaKnown RBP8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 ADAM28Q9UKQ2 775 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 TRHDEQ9UKU6 1024 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 HES2Q9Y543 173 aa8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 TIMM13Q9Y5L4 95 aaPredicted RBP8.63□□□□□ -1.03
SNRPD1-201ENST00000300413 A0A0U1RQF3 1178 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 CILPO75339 1184 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 DAB1O75553 588 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 STAU1O95793 577 aaKnown RBP8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 IRF1P10914 325 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 KCNE1P15382 129 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 GJA5P36382 358 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 ZNF143P52747 638 aaPredicted RBP8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 PDIA2Q13087 525 aaKnown RBP8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 JAMLQ86YT9 394 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 KATNAL2Q8IYT4 538 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 PABPC5Q96DU9 382 aaKnown RBP8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 ERP44Q9BS26 406 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 ASAH2Q9NR71 780 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 RAB6BQ9NRW1 208 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 PCDHA3Q9Y5H8 950 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 TRAV19A0A0A6YYK7 116 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 ERICH4A6NGS2 130 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 RHOCP08134 193 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 CKBP12277 381 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 BDNFP23560 247 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 SLC7A5Q01650 507 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 TLE2Q04725 743 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 BRMS1LQ5PSV4 323 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 FAM35AQ86V20 835 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 SKA2Q8WVK7 121 aaPredicted RBP8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 MYLPFQ96A32 169 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 GDAP1L1Q96MZ0 367 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 AMACRQ9UHK6 382 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 PCDHGC5Q9Y5F6 944 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 SBF2Q86WG5 1849 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 CFAP99D6REC4 459 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 EIF3HO15372 352 aaKnown RBP eCLIP8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 PPP1R37O75864 691 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 GSTA1P08263 222 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 GSTA2P09210 222 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 MYL4P12829 197 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 CST5P28325 142 aaPredicted RBP8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 CCND3P30281 292 aaPredicted RBP8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 PCK1P35558 622 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 NOMO3P69849 1222 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 ORC1Q13415 861 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 LRIG3Q6UXM1 1119 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 SERINC5Q86VE9 423 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 MON1AQ86VX9 555 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 MIB1Q86YT6 1006 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 PDCD6IPQ8WUM4 868 aaKnown RBP8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 ALKBH8Q96BT7 664 aaKnown RBP8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 C16orf70Q9BSU1 422 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 ULBP1Q9BZM6 244 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 ISCUQ9H1K1 167 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 GOLPH3Q9H4A6 298 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 VIPAS39Q9H9C1 493 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 DNMT3LQ9UJW3 386 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 ARHGEF7Q14155 803 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 DDX53Q86TM3 631 aaKnown RBP8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 IRF2BP1Q8IU81 584 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 LPPQ93052 612 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 SAMD11Q96NU1 681 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 CAPS2Q9BXY5 557 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 TRIM54Q9BYV2 358 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 ELAC1Q9H777 363 aaKnown RBP8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 ABCB6Q9NP58 842 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 CNTN3Q9P232 1028 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 USP20Q9Y2K6 914 aa8.62□□□□□ -1.03
SNRPD1-201ENST00000300413 RNASEH1O60930 286 aaKnown RBP8.61□□□□□ -1.03
SNRPD1-201ENST00000300413 GLUD1P00367 558 aa8.61□□□□□ -1.03
SNRPD1-201ENST00000300413 RALBP11234 206 aa8.61□□□□□ -1.03
SNRPD1-201ENST00000300413 CHKAP35790 457 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms