RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 ZNF711Q9Y462 761 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 PCDHGA4Q9Y5G9 962 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 CNTNAP4Q9C0A0 1308 aa13.53□□□□□ -0.24
TVP23A-201ENST00000299866 A0A0B4J269 797 aa13.52□□□□□ -0.24
TVP23A-201ENST00000299866 CCNT2O60583 730 aaKnown RBP13.52□□□□□ -0.24
TVP23A-201ENST00000299866 RBP3P10745 1247 aa13.52□□□□□ -0.24
TVP23A-201ENST00000299866 AOC1P19801 751 aa13.52□□□□□ -0.24
TVP23A-201ENST00000299866 TDRD10Q5VZ19 366 aaKnown RBP13.52□□□□□ -0.24
TVP23A-201ENST00000299866 TTC13Q8NBP0 860 aa13.52□□□□□ -0.24
TVP23A-201ENST00000299866 BSNDQ8WZ55 320 aa13.52□□□□□ -0.24
TVP23A-201ENST00000299866 HSPBAP1Q96EW2 488 aa13.52□□□□□ -0.24
TVP23A-201ENST00000299866 RIT2Q99578 217 aa13.52□□□□□ -0.24
TVP23A-201ENST00000299866 TRIM56Q9BRZ2 755 aaKnown RBP13.52□□□□□ -0.24
TVP23A-201ENST00000299866 MRPL1Q9BYD6 325 aaKnown RBP13.52□□□□□ -0.24
TVP23A-201ENST00000299866 EPB41L1Q9H4G0 881 aa13.52□□□□□ -0.24
TVP23A-201ENST00000299866 CIDEBQ9UHD4 219 aa13.52□□□□□ -0.24
TVP23A-201ENST00000299866 TCEAL9Q9UHQ7 104 aa13.52□□□□□ -0.24
TVP23A-201ENST00000299866 TNRC6CQ9HCJ0 1690 aaKnown RBP13.52□□□□□ -0.24
TVP23A-201ENST00000299866 G3V3G9 751 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 PIM1P11309 404 aaPredicted RBP13.52□□□□□ -0.25
TVP23A-201ENST00000299866 SNRPFP62306 86 aaKnown RBP13.52□□□□□ -0.25
TVP23A-201ENST00000299866 XIAPP98170 497 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 ACAP1Q15027 740 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 DCAF8Q5TAQ9 597 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 TRIM67Q6ZTA4 783 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 GMCL1P1Q8NEA9 526 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 ZNF606Q8WXB4 792 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 FAF2Q96CS3 445 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 CDCA7Q9BWT1 371 aaPredicted RBP13.52□□□□□ -0.25
TVP23A-201ENST00000299866 DDX56Q9NY93 547 aaKnown RBP13.52□□□□□ -0.25
TVP23A-201ENST00000299866 HEMK1Q9Y5R4 338 aaPredicted RBP13.52□□□□□ -0.25
TVP23A-201ENST00000299866 TTLL13PA6NNM8 815 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 H3BSA7 217 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 MMP8P22894 467 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 RPL10AP62906 217 aaKnown RBP13.52□□□□□ -0.25
TVP23A-201ENST00000299866 HSP90AA5PQ58FG0 334 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 NPNTQ6UXI9 565 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 TSHZ1Q6ZSZ6 1077 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 SH3BP5LQ7L8J4 393 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 GALNT4Q8N4A0 578 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 TMEM174Q8WUU8 243 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 SLC9A2Q9UBY0 812 aa13.52□□□□□ -0.25
TVP23A-201ENST00000299866 DNAJA2O60884 412 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 RFPL1O75677 317 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 BPGMP07738 259 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 SRGAP2CP0DJJ0 459 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 SRGAP2BP0DMP2 458 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 PSMA2P25787 234 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 ATXN3P54252 364 aaPredicted RBP13.51□□□□□ -0.25
TVP23A-201ENST00000299866 WASHC5Q12768 1159 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 SNAPC2Q13487 334 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 DCTN2Q13561 401 aaKnown RBP13.51□□□□□ -0.25
TVP23A-201ENST00000299866 VWA5B1Q5TIE3 1220 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 LRRC38Q5VT99 294 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 SCARA3Q6AZY7 606 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 PRR5LQ6MZQ0 368 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 DARS2Q6PI48 645 aaKnown RBP13.51□□□□□ -0.25
TVP23A-201ENST00000299866 IL31RAQ8NI17 732 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 GAB3Q8WWW8 586 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 JADE3Q92613 823 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 ST6GALNAC4Q9H4F1 302 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 BTBD7Q9P203 1132 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 TEX264Q9Y6I9 313 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 STRNO43815 780 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 ZC3H11AO75152 810 aaKnown RBP eCLIP13.51□□□□□ -0.25
TVP23A-201ENST00000299866 SIN3BO75182 1162 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 IL1R2P27930 398 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 MSX2P35548 267 aaPredicted RBP13.51□□□□□ -0.25
TVP23A-201ENST00000299866 LGSNQ5TDP6 509 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 LZICQ8WZA0 190 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 HSPH1Q92598 858 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 BTBD9Q96Q07 612 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 CALN1Q9BXU9 219 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 ARHGEF38Q9NXL2 777 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 ZC3H7BQ9UGR2 993 aaKnown RBP13.51□□□□□ -0.25
TVP23A-201ENST00000299866 AP4B1Q9Y6B7 739 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 AK5Q9Y6K8 562 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 MYH9P35579 1960 aaKnown RBP13.51□□□□□ -0.25
TVP23A-201ENST00000299866 H3BNX3 289 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 KLHL2O95198 593 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 CRTAMO95727 393 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 KCNA4P22459 653 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 CRKP46108 304 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 SERPINB8P50452 374 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 PPIDQ08752 370 aaKnown RBP13.51□□□□□ -0.25
TVP23A-201ENST00000299866 KRT81Q14533 505 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 SH3D19Q5HYK7 790 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 LRRC8BQ6P9F7 803 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 PGM2L1Q6PCE3 622 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 RTKN2Q8IZC4 609 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 SPATA18Q8TC71 538 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 ZC3H12CQ9C0D7 883 aaKnown RBP13.51□□□□□ -0.25
TVP23A-201ENST00000299866 LIN28AQ9H9Z2 209 aaKnown RBP13.51□□□□□ -0.25
TVP23A-201ENST00000299866 SMYD2Q9NRG4 433 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 THAP1Q9NVV9 213 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 TTLL3Q9Y4R7 772 aa13.51□□□□□ -0.25
TVP23A-201ENST00000299866 SF3B1O75533 1304 aaKnown RBP eCLIP13.5□□□□□ -0.25
TVP23A-201ENST00000299866 PTPRJQ12913 1337 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 COL24A1Q17RW2 1714 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 MCF2LO15068 1137 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms