RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 BAIAP3O94812 1187 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 RRM1P23921 792 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TRAF2Q12933 501 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CAMK2GQ13555 558 aaPredicted RBP14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 GIT2Q14161 759 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 MTFR1Q15390 333 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CTXN3Q4LDR2 81 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CCDC92Q53HC0 331 aaPredicted RBP14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 PHACTR4Q8IZ21 702 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 ADAM32Q8TC27 787 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 VPS28Q9UK41 221 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 PLA2G6O60733 806 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 FGFR1P11362 822 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CNTN1Q12860 1018 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 POU6F1Q14863 301 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 AK9Q5TCS8 1911 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 PDPK2PQ6A1A2 396 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 MPZL3Q6UWV2 235 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TATDN2Q93075 761 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CENPTQ96BT3 561 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 C10orf88Q9H8K7 445 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 ANKEF1Q9NU02 776 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 POLLQ9UGP5 575 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TULP4Q9NRJ4 1543 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SAC3D1A6NKF1 404 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 GOLGA8TH3BQL2 631 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 FEN1P39748 380 aaKnown RBP14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 HALP42357 657 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SEMA3FQ13275 785 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CYLC2Q14093 348 aaPredicted RBP14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SLC30A9Q6PML9 568 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 DCDC2Q9UHG0 476 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CPA4Q9UI42 421 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 UBQLN1Q9UMX0 589 aaKnown RBP14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 AP4E1Q9UPM8 1137 aa14□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SPHKAPQ2M3C7 1700 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 GLRA3O75311 464 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 MAPK10P53779 464 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 GJC2Q5T442 439 aaPredicted RBP13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 GPRASP2Q96D09 838 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 OSMRQ99650 979 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 VPS33BQ9H267 617 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CDC42EP4Q9H3Q1 356 aaKnown RBP13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 COPS7BQ9H9Q2 264 aaPredicted RBP13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CCNT2O60583 730 aaKnown RBP13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 GJB6O95452 261 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CALCAP01258 141 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TCHHL1Q5QJ38 904 aaPredicted RBP13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SPOCD1Q6ZMY3 1216 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 RNF180Q86T96 592 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 PPP2R3CQ969Q6 453 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 MAN1C1Q9NR34 630 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 INTS13Q9NVM9 706 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 GEMIN8Q9NWZ8 242 aaKnown RBP13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 JCHAINP01591 159 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CKMP06732 381 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 NQO1P15559 274 aaKnown RBP13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 ZNF571Q7Z3V5 609 aaPredicted RBP13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 A0A087WZ62 844 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 MYL4P12829 197 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 COL23A1Q86Y22 540 aaPredicted RBP13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 MYO1HQ8N1T3 1032 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 RIBC1Q8N443 379 aaPredicted RBP13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 COLGALT1Q8NBJ5 622 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TAS1R2Q8TE23 839 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 FDXACB1Q9BRP7 624 aaPredicted RBP13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 NFKBIZQ9BYH8 718 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CIPCQ9C0C6 399 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SDR42E2A6NKP2 422 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SERPINB1P30740 379 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 FCGRTP55899 365 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 PRKCQQ04759 706 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 MAGEB18Q96M61 343 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 COLEC11Q9BWP8 271 aa13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TDRKHQ9Y2W6 561 aaKnown RBP13.99□□□□□ -0.17
CHRFAM7A-201ENST00000299847 WDR27A2RRH5 827 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 RRN3P2A6NIE6 340 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TOB1P50616 345 aaPredicted RBP13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SCNN1BP51168 640 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 PSMC6P62333 389 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 MRNIPQ6NTE8 343 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CYB5D1Q6P9G0 228 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SCUBE1Q8IWY4 988 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 LPCAT1Q8NF37 534 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SEPHS2Q99611 448 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 APPL1Q9UKG1 709 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 MYO3AQ8NEV4 1616 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 ZNF189O75820 626 aaPredicted RBP13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 KRT75O95678 551 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 FAM86B2P0C5J1 330 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SUPT20HL2P0C7V6 817 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 PNPLA4P41247 253 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 ADGRA1Q86SQ6 560 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 KRT78Q8N1N4 520 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 NMD3Q96D46 503 aaKnown RBP13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TSEN34Q9BSV6 310 aaKnown RBP13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CYP2F1P24903 491 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 GPR141Q7Z602 305 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 FIG4Q92562 907 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TMBIM4Q9HC24 238 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms