RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 STILQ15468 1287 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 SUSD4Q5VX71 490 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 ZSCAN18Q8TBC5 510 aaPredicted RBP15.32■□□□□ 0.04
SCN3B-201ENST00000299333 ERGIC2Q96RQ1 377 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 UBXN6Q9BZV1 441 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 ZNF180Q9UJW8 692 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 PCDHA10Q9Y5I2 948 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 KIF1BO60333 1816 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 TM9SF1O15321 606 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 MT-CO1P00395 513 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 NCKAP1LP55160 1127 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 CNTN1Q12860 1018 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 DGKDQ16760 1214 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 PERM1Q5SV97 790 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 POU5F2Q8N7G0 328 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 URGCPQ8TCY9 931 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 TRPC4APQ8TEL6 797 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 FIG4Q92562 907 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 VPS33AQ96AX1 596 aa15.32■□□□□ 0.04
SCN3B-201ENST00000299333 RFX7Q2KHR2 1363 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 PTGS2P35354 604 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 ATN1P54259 1190 aaPredicted RBP15.31■□□□□ 0.04
SCN3B-201ENST00000299333 GRSF1Q12849 480 aaKnown RBP eCLIP15.31■□□□□ 0.04
SCN3B-201ENST00000299333 MYBPC2Q14324 1141 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 TMEM63BQ5T3F8 832 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 OXNAD1Q96HP4 312 aaPredicted RBP15.31■□□□□ 0.04
SCN3B-201ENST00000299333 PDCD10Q9BUL8 212 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 C1orf50Q9BV19 199 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 COMMD8Q9NX08 183 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 NAALADL1Q9UQQ1 740 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 HLA-DRAP01903 254 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 ALOX15P16050 662 aaPredicted RBP15.31■□□□□ 0.04
SCN3B-201ENST00000299333 CCNCP24863 283 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 ALX1Q15699 326 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 DHFR2Q86XF0 187 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 SPATA2LQ8IUW3 424 aaPredicted RBP15.31■□□□□ 0.04
SCN3B-201ENST00000299333 DNAJC7Q99615 494 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 CHMP1AQ9HD42 196 aaPredicted RBP15.31■□□□□ 0.04
SCN3B-201ENST00000299333 KLHL1Q9NR64 748 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 ARMCX1Q9P291 453 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 SMIM31A0A1B0GVY4 71 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 FSBPO95073 299 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 MYCP01106 439 aaPredicted RBP15.31■□□□□ 0.04
SCN3B-201ENST00000299333 TUFMP49411 452 aaKnown RBP15.31■□□□□ 0.04
SCN3B-201ENST00000299333 BCAP31P51572 246 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 SRP54P61011 504 aaKnown RBP15.31■□□□□ 0.04
SCN3B-201ENST00000299333 BMPR2Q13873 1038 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 NR1D2Q14995 579 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 TSGA10IPQ3SY00 556 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 DCAF6Q58WW2 860 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 THOC7Q6I9Y2 204 aaKnown RBP15.31■□□□□ 0.04
SCN3B-201ENST00000299333 RGS18Q9NS28 235 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 NAGPAQ9UK23 515 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 BTBD3Q9Y2F9 522 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 STON1Q9Y6Q2 735 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 ZFYVE16Q7Z3T8 1539 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 HS6ST1O60243 411 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 CPA3P15088 417 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 EFNA5P52803 228 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 HERVK_113P62684 666 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 CYP2R1Q6VVX0 501 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 ATG14Q6ZNE5 492 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 TMEM110Q86TL2 294 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 TMEM143Q96AN5 459 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 CITED4Q96RK1 184 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 APOL4Q9BPW4 351 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 SPATA16Q9BXB7 569 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 COPS7BQ9H9Q2 264 aaPredicted RBP15.31■□□□□ 0.04
SCN3B-201ENST00000299333 PLEKHG2Q9H7P9 1386 aa15.31■□□□□ 0.04
SCN3B-201ENST00000299333 SAMD9LQ8IVG5 1584 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 A0A087WXM4 84 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 UBDO15205 165 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 INPP4BO15327 924 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 PMPCBO75439 489 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 STIP1P31948 543 aaKnown RBP15.3■□□□□ 0.04
SCN3B-201ENST00000299333 TAB1Q15750 504 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 FAM98BQ52LJ0 330 aaKnown RBP15.3■□□□□ 0.04
SCN3B-201ENST00000299333 CCDC33Q8N5R6 958 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 LRRN4CLQ8ND94 238 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 SPATA33Q96N06 139 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 KIFC1Q9BW19 673 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 TRMT6Q9UJA5 497 aaKnown RBP15.3■□□□□ 0.04
SCN3B-201ENST00000299333 PRLRP16471 622 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 CCDC126Q96EE4 140 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 BDH2Q9BUT1 245 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 SEMA4AQ9H3S1 761 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 FDFT1P37268 417 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 RFX3P48380 749 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 RBP5P82980 135 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 EFR3AQ14156 821 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 PREPLQ4J6C6 727 aaPredicted RBP15.3■□□□□ 0.04
SCN3B-201ENST00000299333 PYDC1Q8WXC3 89 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 FAM136AQ96C01 138 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 PPP1R2P1Q96PQ5 205 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 MLPHQ9BV36 600 aaPredicted RBP15.3■□□□□ 0.04
SCN3B-201ENST00000299333 GPR63Q9BZJ6 419 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 MUC3BQ9H195 1237 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 KRCC1Q9NPI7 259 aaPredicted RBP15.3■□□□□ 0.04
SCN3B-201ENST00000299333 RRN3Q9NYV6 651 aa15.3■□□□□ 0.04
SCN3B-201ENST00000299333 EHD3Q9NZN3 535 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms