RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 DEFB106AQ8N104 65 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 SLC2A13Q96QE2 648 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 C11orf84Q9BUA3 381 aaPredicted RBP21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 DDX23Q9BUQ8 820 aaKnown RBP21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 TRIM62Q9BVG3 475 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 RNF14Q9UBS8 474 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 STAP1Q9ULZ2 295 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 PCDHA11Q9Y5I1 949 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 TEX28O15482 410 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 NOS2P35228 1153 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 PCK1P35558 622 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 UBE3AQ05086 875 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 CDO1Q16878 200 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 DCAF6Q58WW2 860 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 DCAF12L1Q5VU92 463 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 DENND5BQ6ZUT9 1274 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 HFE2Q6ZVN8 426 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 BHLHA9Q7RTU4 235 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 CEP112Q8N8E3 955 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 CEP295NLQ96MC4 621 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 GDF15Q99988 308 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 NCAPGQ9BPX3 1015 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 TCF25Q9BQ70 676 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 NGRNQ9NPE2 291 aaKnown RBP21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 ENTPD7Q9NQZ7 604 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 MTUS1Q9ULD2 1270 aa21.69■■□□□ 1.06
PACSIN3-201ENST00000298838 PLXNA3P51805 1871 aa21.68■■□□□ 1.06
PACSIN3-201ENST00000298838 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.68■■□□□ 1.06
PACSIN3-201ENST00000298838 CAPN9O14815 690 aa21.68■■□□□ 1.06
PACSIN3-201ENST00000298838 CEP104O60308 925 aa21.68■■□□□ 1.06
PACSIN3-201ENST00000298838 RTN3O95197 1032 aaPredicted RBP21.68■■□□□ 1.06
PACSIN3-201ENST00000298838 RB1P06400 928 aa21.68■■□□□ 1.06
PACSIN3-201ENST00000298838 POLNQ7Z5Q5 900 aa21.68■■□□□ 1.06
PACSIN3-201ENST00000298838 ARFGAP1Q8N6T3 406 aa21.68■■□□□ 1.06
PACSIN3-201ENST00000298838 FAM172AQ8WUF8 416 aa21.68■■□□□ 1.06
PACSIN3-201ENST00000298838 SAMD11Q96NU1 681 aa21.68■■□□□ 1.06
PACSIN3-201ENST00000298838 CARD6Q9BX69 1037 aa21.68■■□□□ 1.06
PACSIN3-201ENST00000298838 MAFFQ9ULX9 164 aa21.68■■□□□ 1.06
PACSIN3-201ENST00000298838 GREB1Q4ZG55 1949 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 ARHGEF15O94989 841 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 SLU7O95391 586 aaKnown RBP21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 CXCL14O95715 111 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 TCF4P15884 667 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 GJC1P36383 396 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 PAFAH1B1P43034 410 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 SLC25A52Q3SY17 297 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 SH3PXD2AQ5TCZ1 1133 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 STKLD1Q8NE28 680 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 MNS1Q8NEH6 495 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 GPR152Q8TDT2 470 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 POF1BQ8WVV4 589 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 TGS1Q96RS0 853 aaKnown RBP21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 CYP4F11Q9HBI6 524 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 TLR9Q9NR96 1032 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 SCML2Q9UQR0 700 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 IRAK3Q9Y616 596 aa21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 RANBP2P49792 3224 aaKnown RBP21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 ZNF638Q14966 1978 aaKnown RBP21.67■■□□□ 1.06
PACSIN3-201ENST00000298838 KRT7P08729 469 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 CNPP09543 421 aaKnown RBP21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 ATF6P18850 670 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 MIPP30301 263 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 SLC25A11Q02978 314 aaKnown RBP21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 SMC1AQ14683 1233 aaKnown RBP21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 SEL1L2Q5TEA6 688 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 BSPRYQ5W0U4 402 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 KATNAL2Q8IYT4 538 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 SPPL3Q8TCT6 385 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 COMMD8Q9NX08 183 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 IL37Q9NZH6 218 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 NAALADL1Q9UQQ1 740 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 COL4A4P53420 1690 aaPredicted RBP21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 PRRG1O14668 218 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 SEC24AO95486 1093 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 FYNP06241 537 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 ADH1AP07327 375 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 NCAM1P13591 858 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 ELF1P32519 619 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 SULT1E1P49888 294 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 YWHAGP61981 247 aaKnown RBP eCLIP21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 ZNF211Q13398 564 aaPredicted RBP21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 ZFYVE27Q5T4F4 411 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 STRADAQ7RTN6 431 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 SPRED2Q7Z698 418 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 RASGEF1CQ8N431 466 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 ACTRT1Q8TDG2 376 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 CENPIQ92674 756 aaPredicted RBP21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 MS4A14Q96JA4 679 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 EMILIN2Q9BXX0 1053 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 USP18Q9UMW8 372 aa21.66■■□□□ 1.06
PACSIN3-201ENST00000298838 PGRMC1O00264 195 aaKnown RBP21.65■■□□□ 1.06
PACSIN3-201ENST00000298838 PRPSAP2O60256 369 aa21.65■■□□□ 1.06
PACSIN3-201ENST00000298838 YWHAQP27348 245 aa21.65■■□□□ 1.06
PACSIN3-201ENST00000298838 ERVFC1P60507 584 aa21.65■■□□□ 1.06
PACSIN3-201ENST00000298838 USP46P62068 366 aa21.65■■□□□ 1.06
PACSIN3-201ENST00000298838 SYPL2Q5VXT5 272 aa21.65■■□□□ 1.06
PACSIN3-201ENST00000298838 BEND5Q7L4P6 421 aa21.65■■□□□ 1.06
PACSIN3-201ENST00000298838 NT5C3BQ969T7 300 aa21.65■■□□□ 1.06
PACSIN3-201ENST00000298838 TBCBQ99426 244 aa21.65■■□□□ 1.06
PACSIN3-201ENST00000298838 NPY6RQ99463 290 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms