RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 CREMQ03060 361 aa25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 C15orf59Q2T9L4 293 aaPredicted RBP25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 MGAT5BQ3V5L5 792 aa25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 SPRED2Q7Z698 418 aa25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 FAM149B1Q96BN6 582 aa25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 CEP295NLQ96MC4 621 aa25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 ADAM33Q9BZ11 813 aa25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 ALG13Q9NP73 1137 aaKnown RBP25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 RNF14Q9UBS8 474 aa25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 PCDHA11Q9Y5I1 949 aa25.78■■□□□ 1.72
GTF2A1-201ENST00000298173 PDE2AO00408 941 aaPredicted RBP25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 NOS2P35228 1153 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 ERVFC1P60507 584 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 RPL10AP62906 217 aaKnown RBP25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 BEND5Q7L4P6 421 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 BNIPLQ7Z465 357 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 RASGEF1CQ8N431 466 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 SEPT5Q99719 369 aaPredicted RBP25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 MAFFQ9ULX9 164 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 PLXNA3P51805 1871 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 RNF8O76064 485 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 CXCL14O95715 111 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 LTFP02788 710 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 RWDD2BP57060 319 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 SLC25A11Q02978 314 aaKnown RBP25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 UBE3AQ05086 875 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 SYPL2Q5VXT5 272 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 MS4A14Q96JA4 679 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 CAPZA3Q96KX2 299 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 UBE2OQ9C0C9 1292 aaKnown RBP25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 COMMD8Q9NX08 183 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 SCML2Q9UQR0 700 aa25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.77■■□□□ 1.72
GTF2A1-201ENST00000298173 ENDOD1O94919 500 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 CA3P07451 260 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 CNPP09543 421 aaKnown RBP25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 ATF6P18850 670 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 TFE3P19532 575 aaPredicted RBP25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 DNAJB1P25685 340 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 MIPP30301 263 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 USP46P62068 366 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 SLC25A52Q3SY17 297 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 RAB6CQ53S08 254 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 TXNRD3NBQ6F5E7 133 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 DENND5BQ6ZUT9 1274 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 TMC7Q7Z402 723 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 POLNQ7Z5Q5 900 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 ACTRT1Q8TDG2 376 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 NPY6RQ99463 290 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 CARD6Q9BX69 1037 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 RAB6CQ9H0N0 254 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 FBXO44Q9H4M3 255 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 TTC7AQ9ULT0 858 aaPredicted RBP25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 NAALADL1Q9UQQ1 740 aa25.76■■□□□ 1.71
GTF2A1-201ENST00000298173 PYGMP11217 842 aa25.75■■□□□ 1.71
GTF2A1-201ENST00000298173 IL1R2P27930 398 aa25.75■■□□□ 1.71
GTF2A1-201ENST00000298173 ATP11AP98196 1134 aa25.75■■□□□ 1.71
GTF2A1-201ENST00000298173 ATP13A4Q4VNC1 1196 aa25.75■■□□□ 1.71
GTF2A1-201ENST00000298173 DCAF6Q58WW2 860 aa25.75■■□□□ 1.71
GTF2A1-201ENST00000298173 BSPRYQ5W0U4 402 aa25.75■■□□□ 1.71
GTF2A1-201ENST00000298173 ZNF572Q7Z3I7 529 aaPredicted RBP25.75■■□□□ 1.71
GTF2A1-201ENST00000298173 KATNAL2Q8IYT4 538 aa25.75■■□□□ 1.71
GTF2A1-201ENST00000298173 POF1BQ8WVV4 589 aa25.75■■□□□ 1.71
GTF2A1-201ENST00000298173 NCAPGQ9BPX3 1015 aa25.75■■□□□ 1.71
GTF2A1-201ENST00000298173 CEP104O60308 925 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 HDAC4P56524 1084 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 STRADAQ7RTN6 431 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 SCD5Q86SK9 330 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 TCEAL8Q8IYN2 117 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 STKLD1Q8NE28 680 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 GPR152Q8TDT2 470 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 FAM172AQ8WUF8 416 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 SAMD11Q96NU1 681 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 CALCOCO1Q9P1Z2 691 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 YBX2Q9Y2T7 364 aaKnown RBP25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 RTN3O95197 1032 aaPredicted RBP25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 SLU7O95391 586 aaKnown RBP25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 TRUB2O95900 331 aaKnown RBP25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 SSR1P43307 286 aaKnown RBP25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 ERVK-21P61565 698 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 CAMK1Q14012 370 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 HADHQ16836 314 aaKnown RBP25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 CDO1Q16878 200 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 OTUD1Q5VV17 481 aaPredicted RBP25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 LILRA6Q6PI73 481 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 CYP4V2Q6ZWL3 525 aaPredicted RBP25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 CEP112Q8N8E3 955 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 MRPL43Q8N983 215 aaKnown RBP25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 KLHL5Q96PQ7 755 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 TCF25Q9BQ70 676 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 EHD2Q9NZN4 543 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 USP18Q9UMW8 372 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 MYO16Q9Y6X6 1858 aa25.74■■□□□ 1.71
GTF2A1-201ENST00000298173 H0YGN5 161 aa25.73■■□□□ 1.71
GTF2A1-201ENST00000298173 PGFP49763 221 aa25.73■■□□□ 1.71
GTF2A1-201ENST00000298173 ZNF211Q13398 564 aaPredicted RBP25.73■■□□□ 1.71
GTF2A1-201ENST00000298173 MON1AQ86VX9 555 aa25.73■■□□□ 1.71
GTF2A1-201ENST00000298173 TGS1Q96RS0 853 aaKnown RBP25.73■■□□□ 1.71
GTF2A1-201ENST00000298173 TBCBQ99426 244 aa25.73■■□□□ 1.71
GTF2A1-201ENST00000298173 TTLL2Q9BWV7 592 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms