RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 ATP1A4Q13733 1029 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 COG2Q14746 738 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 GJC2Q5T442 439 aaPredicted RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 N4BP2L1Q5TBK1 243 aaPredicted RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 MRNIPQ6NTE8 343 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 PKN3Q6P5Z2 889 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 BRINP3Q76B58 766 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 NET1Q7Z628 596 aaPredicted RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 SPATA2LQ8IUW3 424 aaPredicted RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 TAS1R2Q8TE23 839 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 KCTD10Q9H3F6 313 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 AVENQ9NQS1 362 aaPredicted RBP11.38□□□□□ -0.59
PBRM1-201ENST00000296302 USP32Q8NFA0 1604 aa11.38□□□□□ -0.59
PBRM1-201ENST00000296302 BTNL10A8MVZ5 291 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 CLOCKO15516 846 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 SKIV2L2P42285 1042 aaKnown RBP11.37□□□□□ -0.59
PBRM1-201ENST00000296302 MPP3Q13368 585 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 AUHQ13825 339 aaKnown RBP11.37□□□□□ -0.59
PBRM1-201ENST00000296302 SV2CQ496J9 727 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 C2CD6Q53TS8 623 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 TCHHL1Q5QJ38 904 aaPredicted RBP11.37□□□□□ -0.59
PBRM1-201ENST00000296302 STRIP1Q5VSL9 837 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 TMC5Q6UXY8 1006 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.37□□□□□ -0.59
PBRM1-201ENST00000296302 ZNF280CQ8ND82 737 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 VPS33AQ96AX1 596 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 INTS13Q9NVM9 706 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 USP18Q9UMW8 372 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 C21orf2O43822 256 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 MAPTP10636 758 aaKnown RBP11.37□□□□□ -0.59
PBRM1-201ENST00000296302 PRKCIP41743 596 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 CHN2P52757 468 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 DCAF4L1Q3SXM0 396 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 AGKQ53H12 422 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 PTRHD1Q6GMV3 140 aaKnown RBP11.37□□□□□ -0.59
PBRM1-201ENST00000296302 CENPLQ8N0S6 344 aaPredicted RBP11.37□□□□□ -0.59
PBRM1-201ENST00000296302 ABRAQ8N0Z2 381 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 TRIM63Q969Q1 353 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 SLC35C1Q96A29 364 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 GPRASP2Q96D09 838 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 ZFYVE19Q96K21 471 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 FAM210AQ96ND0 272 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 CRAMP1Q96RY5 1269 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 CGRRF1Q99675 332 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 CAMSAP1Q5T5Y3 1602 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 C1orf232A0A0U1RR37 186 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 OGTO15294 1046 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 GAS2O43903 313 aaKnown RBP11.37□□□□□ -0.59
PBRM1-201ENST00000296302 MYBL2P10244 700 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 TXNP10599 105 aaKnown RBP11.37□□□□□ -0.59
PBRM1-201ENST00000296302 C4BPBP20851 252 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 KCNJ2P63252 427 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 DHFR2Q86XF0 187 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 ERO1BQ86YB8 467 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 BDH2Q9BUT1 245 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 TBC1D10AQ9BXI6 508 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 DNAJC18Q9H819 358 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 PIN4Q9Y237 131 aaKnown RBP11.37□□□□□ -0.59
PBRM1-201ENST00000296302 FAM95CA0A1B0GW59 222 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 SYNDIG1LA6NDD5 238 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 TRIM13O60858 407 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 AP1G2O75843 785 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 TOMM70O94826 608 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 NTSR2O95665 410 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 ADRA1DP25100 572 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 GRIK1P39086 918 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 CDK7P50613 346 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 AMPD2Q01433 879 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 UGT3A1Q6NUS8 523 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 ANKS3Q6ZW76 656 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 SLC22A9Q8IVM8 553 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 DIS3LQ8TF46 1054 aaKnown RBP11.37□□□□□ -0.59
PBRM1-201ENST00000296302 USP13Q92995 863 aaPredicted RBP11.37□□□□□ -0.59
PBRM1-201ENST00000296302 MTERF3Q96E29 417 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 LRMDAQ9H2I8 198 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 UTP6Q9NYH9 597 aaKnown RBP11.37□□□□□ -0.59
PBRM1-201ENST00000296302 ARMCX1Q9P291 453 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 CROTQ9UKG9 612 aa11.37□□□□□ -0.59
PBRM1-201ENST00000296302 DRG1Q9Y295 367 aaKnown RBP11.37□□□□□ -0.59
PBRM1-201ENST00000296302 LMTK2Q8IWU2 1503 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 NR5A2O00482 541 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 PHGDHO43175 533 aaKnown RBP11.36□□□□□ -0.59
PBRM1-201ENST00000296302 ASNA1O43681 348 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 WBP4O75554 376 aaKnown RBP11.36□□□□□ -0.59
PBRM1-201ENST00000296302 WFS1O76024 890 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 PGK2P07205 417 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 TPP2P29144 1249 aaPredicted RBP11.36□□□□□ -0.59
PBRM1-201ENST00000296302 CYP24A1Q07973 514 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 MARK2Q7KZI7 788 aaKnown RBP11.36□□□□□ -0.59
PBRM1-201ENST00000296302 WDR60Q8WVS4 1066 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 SLC10A4Q96EP9 437 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 RMND5AQ9H871 391 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 IARS2Q9NSE4 1012 aaKnown RBP11.36□□□□□ -0.59
PBRM1-201ENST00000296302 PCYOX1Q9UHG3 505 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 VWA5AO00534 786 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 GP5P40197 560 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 ITGA9Q13797 1035 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 NFIXQ14938 502 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 DGKDQ16760 1214 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 TMEM119Q4V9L6 283 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms