RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 PDGFCQ9NRA1 345 aa20.36■□□□□ 0.85
NKX6-1-201ENST00000295886 CCDC195A0A1B0GUA6 201 aa20.36■□□□□ 0.85
NKX6-1-201ENST00000295886 WFS1O76024 890 aa20.36■□□□□ 0.85
NKX6-1-201ENST00000295886 YWHAZP63104 245 aaKnown RBP20.36■□□□□ 0.85
NKX6-1-201ENST00000295886 CELF3Q5SZQ8 465 aaKnown RBP20.36■□□□□ 0.85
NKX6-1-201ENST00000295886 DSTYKQ6XUX3 929 aa20.36■□□□□ 0.85
NKX6-1-201ENST00000295886 MICAL1Q8TDZ2 1067 aa20.36■□□□□ 0.85
NKX6-1-201ENST00000295886 HPDLQ96IR7 371 aa20.36■□□□□ 0.85
NKX6-1-201ENST00000295886 FRMD8P1Q9BZ68 369 aaPredicted RBP20.36■□□□□ 0.85
NKX6-1-201ENST00000295886 SLC13A1Q9BZW2 595 aa20.36■□□□□ 0.85
NKX6-1-201ENST00000295886 USP29Q9HBJ7 922 aa20.36■□□□□ 0.85
NKX6-1-201ENST00000295886 TSPAN16Q9UKR8 245 aa20.36■□□□□ 0.85
NKX6-1-201ENST00000295886 NR2E3Q9Y5X4 410 aa20.36■□□□□ 0.85
NKX6-1-201ENST00000295886 A0A087WZ62 844 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 FAM237BA0A1B0GVD1 139 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 PRPSAP2O60256 369 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 HAUS5O94927 633 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 TGFB3P10600 412 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 RASSF2P50749 326 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 NEK3P51956 506 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 CXorf38Q8TB03 319 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 CCDC110Q8TBZ0 833 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 FDXACB1Q9BRP7 624 aaPredicted RBP20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 RNF19AQ9NV58 838 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 ANK1P16157 1881 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 C2CD4BA6NLJ0 364 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 FZD9O00144 591 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 IL4RP24394 825 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 ABL2P42684 1182 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 PPP6R3Q5H9R7 873 aaPredicted RBP20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 SH2D5Q6ZV89 423 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 PLD5Q8N7P1 536 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 ALKBH8Q96BT7 664 aaKnown RBP20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 FGD4Q96M96 766 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 CXCL16Q9H2A7 254 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 IFT122Q9HBG6 1241 aa20.35■□□□□ 0.85
NKX6-1-201ENST00000295886 CYB561D2O14569 222 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 TOP3BO95985 862 aaKnown RBP20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 PEX19P40855 299 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 CPA2P48052 419 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 ERFP50548 548 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 IRX1P78414 480 aaPredicted RBP20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 PRKD1Q15139 912 aaPredicted RBP20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 SMAD1Q15797 465 aaKnown RBP20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 KHDC1Q4VXA5 237 aaKnown RBP20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 RNF157Q96PX1 679 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 SRPK1Q96SB4 655 aaKnown RBP20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 LPIN3Q9BQK8 851 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 CNPY3Q9BT09 278 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 PLAC1Q9HBJ0 212 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 SMYD2Q9NRG4 433 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 TNFSF13BQ9Y275 285 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 TTLL3Q9Y4R7 772 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 VTNP04004 478 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 DHRS4L1P0CG22 281 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 MYL2P10916 166 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 TFE3P19532 575 aaPredicted RBP20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 STIP1P31948 543 aaKnown RBP20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 GABRB2P47870 512 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 SERPINB4P48594 390 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 SLC10A6Q3KNW5 377 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 SH3D19Q5HYK7 790 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 MDH1BQ5I0G3 518 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 CAPRIN2Q6IMN6 1127 aaKnown RBP20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 APBB1IPQ7Z5R6 666 aaPredicted RBP20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 ALYREFQ86V81 257 aaKnown RBP20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 PHACTR1Q9C0D0 580 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 TXNRD2Q9NNW7 524 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 FAM49BQ9NUQ9 324 aa20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 ZC3H7BQ9UGR2 993 aaKnown RBP20.34■□□□□ 0.85
NKX6-1-201ENST00000295886 DLDP09622 509 aaKnown RBP20.33■□□□□ 0.85
NKX6-1-201ENST00000295886 GRIK3Q13003 919 aa20.33■□□□□ 0.85
NKX6-1-201ENST00000295886 RFX8Q6ZV50 586 aa20.33■□□□□ 0.85
NKX6-1-201ENST00000295886 SCUBE3Q8IX30 993 aa20.33■□□□□ 0.85
NKX6-1-201ENST00000295886 PQLC3Q8N755 202 aa20.33■□□□□ 0.85
NKX6-1-201ENST00000295886 B3GNT5Q9BYG0 378 aa20.33■□□□□ 0.85
NKX6-1-201ENST00000295886 MARCOQ9UEW3 520 aaPredicted RBP20.33■□□□□ 0.85
NKX6-1-201ENST00000295886 COPEO14579 308 aa20.33■□□□□ 0.84
NKX6-1-201ENST00000295886 IL18RAPO95256 599 aa20.33■□□□□ 0.84
NKX6-1-201ENST00000295886 C1QAP02745 245 aa20.33■□□□□ 0.84
NKX6-1-201ENST00000295886 KITP10721 976 aa20.33■□□□□ 0.84
NKX6-1-201ENST00000295886 ATXN1P54253 815 aaKnown RBP20.33■□□□□ 0.84
NKX6-1-201ENST00000295886 CCDC14Q49A88 953 aa20.33■□□□□ 0.84
NKX6-1-201ENST00000295886 CES4AQ5XG92 561 aa20.33■□□□□ 0.84
NKX6-1-201ENST00000295886 RINLQ6ZS11 566 aa20.33■□□□□ 0.84
NKX6-1-201ENST00000295886 CAND1Q86VP6 1230 aaKnown RBP20.33■□□□□ 0.84
NKX6-1-201ENST00000295886 ARMC2Q8NEN0 867 aa20.33■□□□□ 0.84
NKX6-1-201ENST00000295886 NAF1Q96HR8 494 aaKnown RBP20.33■□□□□ 0.84
NKX6-1-201ENST00000295886 IQCGQ9H095 443 aaKnown RBP20.33■□□□□ 0.84
NKX6-1-201ENST00000295886 TRAFD1O14545 582 aaPredicted RBP20.32■□□□□ 0.84
NKX6-1-201ENST00000295886 IRF6O14896 467 aa20.32■□□□□ 0.84
NKX6-1-201ENST00000295886 LGR5O75473 907 aa20.32■□□□□ 0.84
NKX6-1-201ENST00000295886 ENDOD1O94919 500 aa20.32■□□□□ 0.84
NKX6-1-201ENST00000295886 PFKMP08237 780 aa20.32■□□□□ 0.84
NKX6-1-201ENST00000295886 PCK1P35558 622 aa20.32■□□□□ 0.84
NKX6-1-201ENST00000295886 PTDSS1P48651 473 aaKnown RBP20.32■□□□□ 0.84
NKX6-1-201ENST00000295886 BCAR1P56945 870 aa20.32■□□□□ 0.84
NKX6-1-201ENST00000295886 SLC18A2Q05940 514 aa20.32■□□□□ 0.84
NKX6-1-201ENST00000295886 Q3C1V9 767 aa20.32■□□□□ 0.84
NKX6-1-201ENST00000295886 TRMT10BQ6PF06 316 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms