RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 CNTNAP2Q9UHC6 1331 aa12.54□□□□□ -0.4
CLPB-201ENST00000294053 PTPRFP10586 1907 aa12.54□□□□□ -0.4
CLPB-201ENST00000294053 ZNF189O75820 626 aaPredicted RBP12.54□□□□□ -0.4
CLPB-201ENST00000294053 ITGBL1O95965 494 aaPredicted RBP12.54□□□□□ -0.4
CLPB-201ENST00000294053 ITGA2BP08514 1039 aa12.54□□□□□ -0.4
CLPB-201ENST00000294053 AQP4P55087 323 aa12.54□□□□□ -0.4
CLPB-201ENST00000294053 PEX6Q13608 980 aa12.54□□□□□ -0.4
CLPB-201ENST00000294053 TCHHL1Q5QJ38 904 aaPredicted RBP12.54□□□□□ -0.4
CLPB-201ENST00000294053 GJC2Q5T442 439 aaPredicted RBP12.54□□□□□ -0.4
CLPB-201ENST00000294053 LBX2Q6XYB7 198 aa12.54□□□□□ -0.4
CLPB-201ENST00000294053 ULK2Q8IYT8 1036 aa12.54□□□□□ -0.4
CLPB-201ENST00000294053 RAB3IL1Q8TBN0 382 aa12.54□□□□□ -0.4
CLPB-201ENST00000294053 PANX3Q96QZ0 392 aa12.54□□□□□ -0.4
CLPB-201ENST00000294053 MGAMO43451 1857 aa12.54□□□□□ -0.4
CLPB-201ENST00000294053 LTBP3Q9NS15 1303 aa12.54□□□□□ -0.4
CLPB-201ENST00000294053 A0A0B4J269 797 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 DKC1O60832 514 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLPB-201ENST00000294053 ATG7O95352 703 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 GCAP28676 217 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 GTF2H1P32780 548 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 STAT5BP51692 787 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 MCCD1P59942 119 aaPredicted RBP12.53□□□□□ -0.4
CLPB-201ENST00000294053 YWHAGP61981 247 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLPB-201ENST00000294053 CDK16Q00536 496 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 UBAP2LQ14157 1087 aaKnown RBP12.53□□□□□ -0.4
CLPB-201ENST00000294053 TCEAL1Q15170 157 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 WDR78Q5VTH9 848 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 ZCCHC23Q6ZST2 131 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 CENPUQ71F23 418 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 MON1BQ7L1V2 547 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 TREML1Q86YW5 311 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 PPP2R3CQ969Q6 453 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 ERLEC1Q96DZ1 483 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 PAFAH2Q99487 392 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 SUDS3Q9H7L9 328 aaPredicted RBP12.53□□□□□ -0.4
CLPB-201ENST00000294053 SLC7A8Q9UHI5 535 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 COMMD3-BMI1R4GMX3 469 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 WDR90Q96KV7 1748 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 I3L4J1 428 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 B4GALT5O43286 388 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 WEE2P0C1S8 567 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 POTEJP0CG39 1038 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 PEX2P28328 305 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 CLDN10P78369 228 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 LSAMPQ13449 338 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 TTLL12Q14166 644 aaPredicted RBP12.53□□□□□ -0.4
CLPB-201ENST00000294053 Q3C1V9 767 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 SFT2D3Q587I9 215 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 SH2D4BQ5SQS7 431 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 TXNRD3NBQ6F5E7 133 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 USP37Q86T82 979 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 TMEM192Q8IY95 271 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 OR6Y1Q8NGX8 325 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 LENG1Q96BZ8 264 aaPredicted RBP12.53□□□□□ -0.4
CLPB-201ENST00000294053 KLHL4Q9C0H6 718 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 ARHGEF38Q9NXL2 777 aa12.53□□□□□ -0.4
CLPB-201ENST00000294053 ZMPSTE24O75844 475 aa12.52□□□□□ -0.4
CLPB-201ENST00000294053 NAMPTP43490 491 aa12.52□□□□□ -0.4
CLPB-201ENST00000294053 AQP5P55064 265 aa12.52□□□□□ -0.4
CLPB-201ENST00000294053 ADARP55265 1226 aaKnown RBP12.52□□□□□ -0.4
CLPB-201ENST00000294053 NOMO3P69849 1222 aa12.52□□□□□ -0.4
CLPB-201ENST00000294053 KCTD21Q4G0X4 260 aa12.52□□□□□ -0.4
CLPB-201ENST00000294053 BBOF1Q8ND07 529 aa12.52□□□□□ -0.4
CLPB-201ENST00000294053 GSDMBQ8TAX9 411 aa12.52□□□□□ -0.4
CLPB-201ENST00000294053 VTI1AQ96AJ9 217 aa12.52□□□□□ -0.4
CLPB-201ENST00000294053 PTCD3Q96EY7 689 aaKnown RBP12.52□□□□□ -0.4
CLPB-201ENST00000294053 CNBD2Q96M20 576 aa12.52□□□□□ -0.4
CLPB-201ENST00000294053 TTC25Q96NG3 672 aa12.52□□□□□ -0.4
CLPB-201ENST00000294053 NR1H4Q96RI1 486 aaPredicted RBP12.52□□□□□ -0.4
CLPB-201ENST00000294053 SPATC1LQ9H0A9 340 aa12.52□□□□□ -0.4
CLPB-201ENST00000294053 TJP2Q9UDY2 1190 aa12.52□□□□□ -0.4
CLPB-201ENST00000294053 ADGRA2Q96PE1 1338 aa12.52□□□□□ -0.4
CLPB-201ENST00000294053 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 TTC36A6NLP5 189 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 TRAFD1O14545 582 aaPredicted RBP12.52□□□□□ -0.41
CLPB-201ENST00000294053 MSX2P35548 267 aaPredicted RBP12.52□□□□□ -0.41
CLPB-201ENST00000294053 GRIA2P42262 883 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 NRLP54845 237 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 MYL6P60660 151 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 BASP1P80723 227 aaKnown RBP12.52□□□□□ -0.41
CLPB-201ENST00000294053 ZNF200P98182 395 aaPredicted RBP12.52□□□□□ -0.41
CLPB-201ENST00000294053 CENPCQ03188 943 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 TRIM67Q6ZTA4 783 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 FBXO16Q8IX29 292 aaPredicted RBP12.52□□□□□ -0.41
CLPB-201ENST00000294053 THNSL1Q8IYQ7 743 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 RNF168Q8IYW5 571 aaPredicted RBP12.52□□□□□ -0.41
CLPB-201ENST00000294053 RNF149Q8NC42 400 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 GDPD5Q8WTR4 605 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 TUBB6Q9BUF5 446 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 MIS12Q9H081 205 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 FAF1Q9UNN5 650 aaPredicted RBP12.52□□□□□ -0.41
CLPB-201ENST00000294053 MTO1Q9Y2Z2 717 aaKnown RBP12.52□□□□□ -0.41
CLPB-201ENST00000294053 HEMK1Q9Y5R4 338 aaPredicted RBP12.52□□□□□ -0.41
CLPB-201ENST00000294053 ACTL7BQ9Y614 415 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 STYXL1Q9Y6J8 313 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 PRR5-ARHGAP8B1AHC4 643 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 RARBP10826 455 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 MAN1A1P33908 653 aa12.52□□□□□ -0.41
CLPB-201ENST00000294053 GEMIN4P57678 1058 aaKnown RBP12.52□□□□□ -0.41
CLPB-201ENST00000294053 ARHGAP8P85298 464 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms