RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 MAP3K13O43283 966 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 KLHL18O94889 574 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 PTPN4P29074 926 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 FLT3P36888 993 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 RGS2P41220 211 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 RASA2Q15283 850 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 CACHD1Q5VU97 1274 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 MIER2Q8N344 545 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 LRRC39Q96DD0 335 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 MCRS1Q96EZ8 462 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 MPP4Q96JB8 637 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 TMEM79Q9BSE2 394 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 FHDC1Q9C0D6 1143 aaPredicted RBP11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 KCTD10Q9H3F6 313 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 PIDD1Q9HB75 910 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 VTA1Q9NP79 307 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 TAGLN3Q9UI15 199 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 SH3GLB1Q9Y371 365 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 CYBBP04839 570 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 RARBP10826 455 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 TGM2P21980 687 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 NME5P56597 212 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 PSMC6P62333 389 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 SPP2Q13103 211 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 SLC5A9Q2M3M2 681 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 ZRANB3Q5FWF4 1079 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 C4orf22Q6V702 233 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 HS6ST3Q8IZP7 471 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 JADE3Q92613 823 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 FANCEQ9HB96 536 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 TMEM165Q9HC07 324 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 DNAJC16Q9Y2G8 782 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 KPNA4O00629 521 aaPredicted RBP11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 DGAT1O75907 488 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 WFS1O76024 890 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 MZF1P28698 734 aaPredicted RBP11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 RRM2P31350 389 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 IL12RB1P42701 662 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 NFYCQ13952 458 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 ARHGEF7Q14155 803 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 TRMT5Q32P41 509 aaKnown RBP11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 AGAP9Q5VTM2 703 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 LRP10Q7Z4F1 713 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 KRT77Q7Z794 578 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 ZNF554Q86TJ5 538 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 CHSY1Q86X52 802 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 CENPLQ8N0S6 344 aaPredicted RBP11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 NEDD1Q8NHV4 660 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 FEZF2Q8TBJ5 459 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 FAR2Q96K12 515 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 PPP1R2P1Q96PQ5 205 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 SMARCAD1Q9H4L7 1026 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 TMBIM4Q9HC24 238 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 INTS13Q9NVM9 706 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 WWOXQ9NZC7 414 aa11.09□□□□□ -0.63
PKNOX1-201ENST00000291547 RGPD5Q99666 1765 aa11.08□□□□□ -0.63
PKNOX1-201ENST00000291547 FAM25AB3EWG3 89 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 FAM25CB3EWG5 89 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 FAM25GB3EWG6 89 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 MYBP10242 640 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 ALOX15P16050 662 aaPredicted RBP11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 CDC16Q13042 620 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 SHROOM1Q2M3G4 852 aaPredicted RBP11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 LACTB2Q53H82 288 aaPredicted RBP11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 GPAT2Q6NUI2 795 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 STOX1Q6ZVD7 989 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 VN1R5Q7Z5H4 357 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 FBXO33Q7Z6M2 555 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 C11orf96Q7Z7L8 435 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 ATG16L2Q8NAA4 619 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 GPR63Q9BZJ6 419 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 FAM49BQ9NUQ9 324 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 COPG2Q9UBF2 871 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 E9PBE3 544 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 VWA5AO00534 786 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 MTSS1O43312 755 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 ATP6V1G1O75348 118 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 NPM3O75607 178 aaKnown RBP11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 PARNO95453 639 aaKnown RBP11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 HLA-DRAP01903 254 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 PIK3R1P27986 724 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 STIP1P31948 543 aaKnown RBP11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 STAT5BP51692 787 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 CLEC16AQ2KHT3 1053 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 ALFQ53S48 1182 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 KLHDC7AQ5VTJ3 777 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 CROCCP3Q8IVE0 287 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 UXS1Q8NBZ7 420 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 REXO4Q9GZR2 422 aaKnown RBP11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 SPON1Q9HCB6 807 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 GTF2A1LQ9UNN4 478 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 KLHL41O60662 606 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 MED26O95402 600 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 RARGP13631 454 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 GPD1P21695 349 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 CSE1LP55060 971 aaKnown RBP11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 IL5RAQ01344 420 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 TRAF2Q12933 501 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 TSGA10IPQ3SY00 556 aa11.08□□□□□ -0.64
PKNOX1-201ENST00000291547 SEL1L3Q68CR1 1132 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms