RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 TBC1D14Q9P2M4 693 aa11.06□□□□□ -0.64
SNF8-201ENST00000290330 HOOK1Q9UJC3 728 aaKnown RBP11.06□□□□□ -0.64
SNF8-201ENST00000290330 TRIM49BA6NDI0 452 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 GOLGA6L3A6NEY3 463 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 K7EQS6 105 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 SLC16A3O15427 465 aaKnown RBP11.05□□□□□ -0.64
SNF8-201ENST00000290330 TLR5O60602 858 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 RETP07949 1114 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 ACO1P21399 889 aaKnown RBP11.05□□□□□ -0.64
SNF8-201ENST00000290330 SLC6A11P48066 632 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 LRRC63Q05C16 580 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 CBWD6Q4V339 395 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 DCAF17Q5H9S7 520 aaPredicted RBP11.05□□□□□ -0.64
SNF8-201ENST00000290330 CBWD3Q5JTY5 395 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 CBWD5Q5RIA9 395 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 PPP1R26Q5T8A7 1209 aaPredicted RBP11.05□□□□□ -0.64
SNF8-201ENST00000290330 TCERG1LQ5VWI1 586 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 ISM2Q6H9L7 571 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 TTC39CQ8N584 583 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 CCDC26Q8TAB7 109 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 TATDN2Q93075 761 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 JAKMIP2Q96AA8 810 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 OTUB2Q96DC9 234 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 ARID3AQ99856 593 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 DUSP9Q99956 384 aaKnown RBP11.05□□□□□ -0.64
SNF8-201ENST00000290330 GTPBP4Q9BZE4 634 aaKnown RBP11.05□□□□□ -0.64
SNF8-201ENST00000290330 DNAI2Q9GZS0 605 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 NACA2Q9H009 215 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 PARD6AQ9NPB6 346 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 CYLDQ9NQC7 956 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 TLR8Q9NR97 1041 aaKnown RBP11.05□□□□□ -0.64
SNF8-201ENST00000290330 CISHQ9NSE2 258 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 OSER1Q9NX31 292 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 SCML2Q9UQR0 700 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 COQ4Q9Y3A0 265 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 SH3BP1Q9Y3L3 701 aa11.05□□□□□ -0.64
SNF8-201ENST00000290330 HELZP42694 1942 aaKnown RBP11.04□□□□□ -0.64
SNF8-201ENST00000290330 ANTXRLA6NF34 631 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 PSMA7O14818 248 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 CYP26A1O43174 497 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 LETM1O95202 739 aaPredicted RBP11.04□□□□□ -0.64
SNF8-201ENST00000290330 TBX18O95935 607 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 ADH1CP00326 375 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 CD44P16070 742 aaKnown RBP11.04□□□□□ -0.64
SNF8-201ENST00000290330 ATP5C1P36542 298 aaKnown RBP11.04□□□□□ -0.64
SNF8-201ENST00000290330 EIF2DP41214 584 aaKnown RBP11.04□□□□□ -0.64
SNF8-201ENST00000290330 KIF11P52732 1056 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 RAD23BP54727 409 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 UBE2HP62256 183 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 SPEM2Q0P670 501 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 MESP2Q0VG99 397 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 DMC1Q14565 340 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 LY6G5CQ5SRR4 150 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 CEP68Q76N32 757 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 ERMP1Q7Z2K6 904 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 C12orf40Q86WS4 652 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 BBS7Q8IWZ6 715 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 FAM160A2Q8N612 972 aaPredicted RBP11.04□□□□□ -0.64
SNF8-201ENST00000290330 USP33Q8TEY7 942 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 GAB3Q8WWW8 586 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 WBP2Q969T9 261 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 SLC35C1Q96A29 364 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 ACDQ96AP0 544 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 TMEM176AQ96HP8 235 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 DHTKD1Q96HY7 919 aaPredicted RBP11.04□□□□□ -0.64
SNF8-201ENST00000290330 HEXIM2Q96MH2 286 aaKnown RBP11.04□□□□□ -0.64
SNF8-201ENST00000290330 HHIPQ96QV1 700 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 PNKPQ96T60 521 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 KLF16Q9BXK1 252 aaPredicted RBP11.04□□□□□ -0.64
SNF8-201ENST00000290330 DUSP16Q9BY84 665 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 FAM124BQ9H5Z6 455 aaPredicted RBP11.04□□□□□ -0.64
SNF8-201ENST00000290330 NMUR1Q9HB89 426 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 DLL3Q9NYJ7 618 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 ARMCX3Q9UH62 379 aaPredicted RBP11.04□□□□□ -0.64
SNF8-201ENST00000290330 MAN1B1Q9UKM7 699 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 USP3Q9Y6I4 520 aa11.04□□□□□ -0.64
SNF8-201ENST00000290330 A0A0A0MRY4 1105 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 A0A1W2PQH9 124 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 GREM1O60565 184 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 RPP40O75818 363 aaKnown RBP11.03□□□□□ -0.64
SNF8-201ENST00000290330 KAT7O95251 611 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 ADH5P11766 374 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 BMP6P22004 513 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 SEC13P55735 322 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 FOXK2Q01167 660 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 LMNB2Q03252 620 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 GAD2Q05329 585 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 STIM1Q13586 685 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 PUM1Q14671 1186 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNF8-201ENST00000290330 C2orf27AQ580R0 203 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 KLHDC10Q6PID8 442 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 HTR3DQ70Z44 454 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 CCDC186Q7Z3E2 898 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.03□□□□□ -0.64
SNF8-201ENST00000290330 SFTPA1Q8IWL2 248 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 SLC4A11Q8NBS3 891 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 SPHK2Q9NRA0 654 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNF8-201ENST00000290330 EBF1Q9UH73 591 aa11.03□□□□□ -0.64
SNF8-201ENST00000290330 USP18Q9UMW8 372 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms