RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 OSBPL6Q9BZF3 934 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 MYH9P35579 1960 aaKnown RBP15.25■□□□□ 0.03
SEC16A-202ENST00000290037 HNRNPH3P31942 346 aaKnown RBP15.25■□□□□ 0.03
SEC16A-202ENST00000290037 NCALDP61601 193 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 NSUN2Q08J23 767 aaKnown RBP eCLIP15.25■□□□□ 0.03
SEC16A-202ENST00000290037 CDH17Q12864 832 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 TMEM119Q4V9L6 283 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 ARMCX4Q5H9R4 360 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 TTC33Q6PID6 262 aaPredicted RBP15.25■□□□□ 0.03
SEC16A-202ENST00000290037 TAS2R42Q7RTR8 314 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 ZNF720Q7Z2F6 126 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 UNC93AQ86WB7 457 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 HEXDCQ8WVB3 486 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 ANLNQ9NQW6 1124 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 UMODL1Q5DID0 1318 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 A0A088AWK7 358 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 ZNF10P21506 573 aaPredicted RBP15.25■□□□□ 0.03
SEC16A-202ENST00000290037 TSTA3Q13630 321 aaPredicted RBP15.25■□□□□ 0.03
SEC16A-202ENST00000290037 CNGA2Q16280 664 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 PHKG1Q16816 387 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 APOPT1Q96IL0 206 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 ZIM3Q96PE6 472 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 IFRD1O00458 451 aaPredicted RBP15.25■□□□□ 0.03
SEC16A-202ENST00000290037 WFS1O76024 890 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 NEK5Q6P3R8 708 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 CINPQ9BW66 212 aaPredicted RBP15.25■□□□□ 0.03
SEC16A-202ENST00000290037 TMEM134Q9H6X4 195 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 TMEM216Q9P0N5 145 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 TRIM49P0CI25 452 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 TRIM49CP0CI26 452 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 CLEC16AQ2KHT3 1053 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 DCLK2Q8N568 766 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 DCLK3Q9C098 648 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 BARX2Q9UMQ3 279 aaPredicted RBP15.25■□□□□ 0.03
SEC16A-202ENST00000290037 NID2Q14112 1375 aa15.25■□□□□ 0.03
SEC16A-202ENST00000290037 GPAT2Q6NUI2 795 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 CYB5D1Q6P9G0 228 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 REXO1L1PQ8IX06 675 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 ZCCHC9Q8N567 271 aaKnown RBP15.24■□□□□ 0.03
SEC16A-202ENST00000290037 C1QTNF7Q9BXJ2 289 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 PIN4Q9Y237 131 aaKnown RBP15.24■□□□□ 0.03
SEC16A-202ENST00000290037 CNOT3O75175 753 aaKnown RBP15.24■□□□□ 0.03
SEC16A-202ENST00000290037 CLK1P49759 484 aaKnown RBP15.24■□□□□ 0.03
SEC16A-202ENST00000290037 TGFB2P61812 414 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 RNF180Q86T96 592 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 PSTKQ8IV42 348 aaKnown RBP15.24■□□□□ 0.03
SEC16A-202ENST00000290037 PTCD2Q8WV60 388 aaKnown RBP15.24■□□□□ 0.03
SEC16A-202ENST00000290037 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.24■□□□□ 0.033e-7■□□□□ 9.2
SEC16A-202ENST00000290037 NCANO14594 1321 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 PHF20L1A8MW92 1017 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 CCDC159P0C7I6 412 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 CYP24A1Q07973 514 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 PRR23D1E9PI22 279 aaPredicted RBP15.24■□□□□ 0.03
SEC16A-202ENST00000290037 CXCL11O14625 94 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 PRR23D2P0DMB1 279 aaPredicted RBP15.24■□□□□ 0.03
SEC16A-202ENST00000290037 SLC29A2Q14542 456 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 PTRHD1Q6GMV3 140 aaKnown RBP15.24■□□□□ 0.03
SEC16A-202ENST00000290037 ABTB1Q969K4 478 aaPredicted RBP15.24■□□□□ 0.03
SEC16A-202ENST00000290037 ECSITQ9BQ95 431 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 USP1O94782 785 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 KRT6AP02538 564 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 KRT6BP04259 564 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 KRT6CP48668 564 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 ANTXR2P58335 489 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 LRRC74AQ0VAA2 488 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 YAF2Q8IY57 180 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 CNDP1Q96KN2 507 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 TRMOQ9BU70 441 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 KLHL11Q9NVR0 708 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 TMCC3Q9ULS5 477 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 SPDYE5A6NIY4 337 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 CST8O60676 142 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 SPP2Q13103 211 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 SPDYE7PQ495Y7 208 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 GALNT18Q6P9A2 607 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 NEK6Q9HC98 313 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 CYP3A7-CYP3A51PA0A087WV96 503 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 ZSCAN5CA6NGD5 496 aaPredicted RBP15.24■□□□□ 0.03
SEC16A-202ENST00000290037 VIL1P09327 827 aaKnown RBP15.24■□□□□ 0.03
SEC16A-202ENST00000290037 RRM1P23921 792 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 CYP3A7P24462 503 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 NFIXQ14938 502 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 ANKRD23Q86SG2 305 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 GJD3Q8N144 294 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 NOD2Q9HC29 1040 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 CYLDQ9NQC7 956 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 DNAAF2Q9NVR5 837 aaKnown RBP15.24■□□□□ 0.03
SEC16A-202ENST00000290037 RCOR3Q9P2K3 495 aaPredicted RBP15.24■□□□□ 0.03
SEC16A-202ENST00000290037 SALL3Q9BXA9 1300 aa15.24■□□□□ 0.03
SEC16A-202ENST00000290037 TADA2AO75478 443 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 CPB1P15086 417 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 DNAJB7Q7Z6W7 309 aaPredicted RBP15.23■□□□□ 0.03
SEC16A-202ENST00000290037 FUCA2Q9BTY2 467 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 PCDHA3Q9Y5H8 950 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 ST3GAL1Q11201 340 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 IL22Q9GZX6 179 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 GNRH1P01148 92 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 TALDO1P37837 337 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 ELMO2Q96JJ3 720 aa15.23■□□□□ 0.03
SEC16A-202ENST00000290037 FETUBQ9UGM5 382 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms