RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 PM20D1Q6GTS8 502 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 ELMSAN1Q6PJG2 1045 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 KIF18AQ8NI77 898 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 TMEM209Q96SK2 561 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 CPXM1Q96SM3 734 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 TTLL2Q9BWV7 592 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 RRN3Q9NYV6 651 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 CTTNBP2NLQ9P2B4 639 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 DPP7Q9UHL4 492 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 DOPEY2Q9Y3R5 2298 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 C2orf71A6NGG8 1288 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 PPP3CCP48454 512 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 SLC6A3Q01959 620 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 EFHC1Q5JVL4 640 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 PMF1Q6P1K2 205 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 OLFML1Q6UWY5 402 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 SLC26A9Q7LBE3 791 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 UBA3Q8TBC4 463 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 TRMT2BQ96GJ1 504 aaKnown RBP8.83□□□□□ -1
PTPDC1-201ENST00000288976 KLHL5Q96PQ7 755 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 FBXW11Q9UKB1 542 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 CDY1Q9Y6F8 540 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 EP300Q09472 2414 aaPredicted RBP8.83□□□□□ -1
PTPDC1-201ENST00000288976 WDR27A2RRH5 827 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 RCCD1A6NED2 376 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 CA3P07451 260 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 ATF2P15336 505 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 VPS41P49754 854 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 PPP1R7Q15435 360 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 DNAJC24Q6P3W2 148 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 PRSS55Q6UWB4 352 aaPredicted RBP8.83□□□□□ -1
PTPDC1-201ENST00000288976 RSPO2Q6UXX9 243 aaPredicted RBP8.83□□□□□ -1
PTPDC1-201ENST00000288976 RNF19BQ6ZMZ0 732 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 SLFN11Q7Z7L1 901 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 DCLK2Q8N568 766 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 GDAP1Q8TB36 358 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 SLC35G2Q8TBE7 412 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 ZNF564Q8TBZ8 553 aaPredicted RBP8.83□□□□□ -1
PTPDC1-201ENST00000288976 TCF25Q9BQ70 676 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 C11orf70Q9BRQ4 267 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 NUP85Q9BW27 656 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 FBXO44Q9H4M3 255 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 ZNF318Q5VUA4 2279 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 GOLGA6L7A0A1B0GV03 622 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 NEMP1O14524 444 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 TNFRSF10BO14763 440 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 LRIT3Q3SXY7 679 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 LEKR1Q6ZMV7 388 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 CCDC149Q6ZUS6 474 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 ZMIZ2Q8NF64 920 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 TPCN2Q8NHX9 752 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 TBC1D31Q96DN5 1066 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 SLC2A13Q96QE2 648 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 C17orf80Q9BSJ5 609 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 RHOBTB2Q9BYZ6 727 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 ENTPD7Q9NQZ7 604 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 IP6K2Q9UHH9 426 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 SCML2Q9UQR0 700 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 ASB3Q9Y575 518 aa8.83□□□□□ -1
PTPDC1-201ENST00000288976 MTCL1Q9Y4B5 1905 aaKnown RBP8.83□□□□□ -1
PTPDC1-201ENST00000288976 AHCTF1Q8WYP5 2266 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 TYW5A2RUC4 315 aaKnown RBP8.82□□□□□ -1
PTPDC1-201ENST00000288976 USP27XA6NNY8 438 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 SOBPA7XYQ1 873 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 GIPC1O14908 333 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 HSF2BPO75031 334 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 FGF19O95750 216 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 HOXA9P31269 272 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 PSEN1P49768 467 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 MAP3K7CLP57077 242 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 MRPS5P82675 430 aaKnown RBP8.82□□□□□ -1
PTPDC1-201ENST00000288976 PPP2R2DQ66LE6 453 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 FAM183BPQ6ZVS7 135 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 PIGZQ86VD9 579 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 MYLK4Q86YV6 388 aaPredicted RBP8.82□□□□□ -1
PTPDC1-201ENST00000288976 SIX6OS1Q8N1H7 587 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 MRPL43Q8N983 215 aaKnown RBP8.82□□□□□ -1
PTPDC1-201ENST00000288976 LRRC57Q8N9N7 239 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 ARHGEF26Q96DR7 871 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 CDK5RAP1Q96SZ6 601 aaKnown RBP8.82□□□□□ -1
PTPDC1-201ENST00000288976 LPIN3Q9BQK8 851 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 LACRTQ9GZZ8 138 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 NKX2-4Q9H2Z4 354 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 PLEKHA4Q9H4M7 779 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 E5RJQ4 531 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 SNX30Q5VWJ9 437 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 NUP93Q8N1F7 819 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 PDZD8Q8NEN9 1154 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 FEZF2Q8TBJ5 459 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 POF1BQ8WVV4 589 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 PPP2R3CQ969Q6 453 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 SELENOOQ9BVL4 669 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 CLDN5O00501 218 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 OBSL1O75147 1896 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 MYZAPP0CAP1 466 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 PFKLP17858 780 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 BDNFP23560 247 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 GRIK1P39086 918 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 GPM6BQ13491 265 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 LILRA6Q6PI73 481 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms