RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 PDGFCQ9NRA1 345 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 RBM22Q9NW64 420 aaKnown RBP eCLIP19.16■□□□□ 0.66
PCDH1-201ENST00000287008 PCDHAC2Q9Y5I4 1007 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 CDY2AQ9Y6F7 541 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 CDY1Q9Y6F8 540 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 SERPINF2P08697 491 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 MZF1P28698 734 aaPredicted RBP19.16■□□□□ 0.66
PCDH1-201ENST00000287008 NUMBP49757 651 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 SLC29A2Q14542 456 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 PPM1LQ5SGD2 360 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 SENP8Q96LD8 212 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 MRPL1Q9BYD6 325 aaKnown RBP19.16■□□□□ 0.66
PCDH1-201ENST00000287008 FRMD3A2A2Y4 597 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 MAP3K13O43283 966 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 APOA4P06727 396 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 EPB42P16452 691 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 TERF2Q15554 542 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 DENND1BQ6P3S1 775 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 IFNEQ86WN2 208 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 OR9Q1Q8NGQ5 310 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 SLC2A14Q8TDB8 520 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 APOL2Q9BQE5 337 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 SPASTQ9UBP0 616 aa19.16■□□□□ 0.66
PCDH1-201ENST00000287008 ZBTB39O15060 712 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 CHN1P15882 459 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 MDH1P40925 334 aaKnown RBP19.15■□□□□ 0.66
PCDH1-201ENST00000287008 CDH8P55286 799 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 SPOCD1Q6ZMY3 1216 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 ILDR2Q71H61 639 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 TMEM86AQ8N2M4 240 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 NOA1Q8NC60 698 aaKnown RBP19.15■□□□□ 0.66
PCDH1-201ENST00000287008 OR2W6PQ8NHA6 318 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 ACTL9Q8TC94 416 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 NR1H4Q96RI1 486 aaPredicted RBP19.15■□□□□ 0.66
PCDH1-201ENST00000287008 PRMT1Q99873 361 aaKnown RBP19.15■□□□□ 0.66
PCDH1-201ENST00000287008 PACSIN1Q9BY11 444 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 BLOC1S4Q9NUP1 217 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 ANKRD65E5RJM6 399 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 PAEPP09466 180 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 HIC1Q14526 733 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 ANO5Q75V66 913 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 CCDC33Q8N5R6 958 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 KLRG1Q96E93 195 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 TIMM44O43615 452 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 DRG1Q9Y295 367 aaKnown RBP19.15■□□□□ 0.66
PCDH1-201ENST00000287008 H2AFYO75367 372 aaKnown RBP19.15■□□□□ 0.66
PCDH1-201ENST00000287008 OCM2P0CE71 109 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 OCMP0CE72 109 aaPredicted RBP19.15■□□□□ 0.66
PCDH1-201ENST00000287008 ACADMP11310 421 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 PRKAR2AP13861 404 aaKnown RBP19.15■□□□□ 0.66
PCDH1-201ENST00000287008 EEF1DP29692 281 aaKnown RBP19.15■□□□□ 0.66
PCDH1-201ENST00000287008 ST13P4Q8IZP2 240 aaPredicted RBP19.15■□□□□ 0.66
PCDH1-201ENST00000287008 NEUROG2Q9H2A3 272 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 NPHS2Q9NP85 383 aa19.15■□□□□ 0.66
PCDH1-201ENST00000287008 TMEM120BA0PK00 339 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 PIK3CDO00329 1044 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 DDX39BQ13838 428 aaKnown RBP19.14■□□□□ 0.65
PCDH1-201ENST00000287008 UBE2OQ9C0C9 1292 aaKnown RBP19.14■□□□□ 0.65
PCDH1-201ENST00000287008 PDGFDQ9GZP0 370 aaPredicted RBP19.14■□□□□ 0.65
PCDH1-201ENST00000287008 TMEM134Q9H6X4 195 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 GLTPD2A6NH11 291 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 ENO3P13929 434 aaPredicted RBP19.14■□□□□ 0.65
PCDH1-201ENST00000287008 PABPC1LQ4VXU2 614 aaKnown RBP19.14■□□□□ 0.65
PCDH1-201ENST00000287008 AGBL2Q5U5Z8 902 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 VCPIP1Q96JH7 1222 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 CCDC90BQ9GZT6 254 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 OSGEPQ9NPF4 335 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 AURKCQ9UQB9 309 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 UBIAD1Q9Y5Z9 338 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 CAPN6Q9Y6Q1 641 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 DEPDC5O75140 1603 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 PGM1P36871 562 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 SCNN1GP51170 649 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 NUP93Q8N1F7 819 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 E2F7Q96AV8 911 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 CEP19Q96LK0 163 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 ATP13A1Q9HD20 1204 aa19.14■□□□□ 0.65
PCDH1-201ENST00000287008 A0A0A6YYK5 440 aaPredicted RBP19.13■□□□□ 0.65
PCDH1-201ENST00000287008 KRT16P08779 473 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 IGFBP4P22692 258 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 PLA2G4AP47712 749 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 RENBPP51606 427 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 MCOLN2Q8IZK6 566 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 TMEM199Q8N511 208 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 ZNF558Q96NG5 402 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 XPO6Q96QU8 1125 aaKnown RBP19.13■□□□□ 0.65
PCDH1-201ENST00000287008 PNKPQ96T60 521 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 NMRK1Q9NWW6 199 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 ARHGAP20Q9P2F6 1191 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 DDHD2O94830 711 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 INPP5AQ14642 412 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 PSMD10O75832 226 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 SUPT7LO94864 414 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 ENO1P06733 434 aaKnown RBP19.13■□□□□ 0.65
PCDH1-201ENST00000287008 SLC39A12Q504Y0 691 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 CCDC157Q569K6 752 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 TMA16Q96EY4 203 aaKnown RBP19.13■□□□□ 0.65
PCDH1-201ENST00000287008 DUSP10Q9Y6W6 482 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 LRRIQ3A6PVS8 624 aaPredicted RBP19.13■□□□□ 0.65
PCDH1-201ENST00000287008 MEIS2O14770 477 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms