RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 USP46P62068 366 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 PITX1P78337 314 aaPredicted RBP11.91□□□□□ -0.5
XRCC4-201ENST00000282268 TUBB2AQ13885 445 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 ODF2Q5BJF6 829 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 SYPL2Q5VXT5 272 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 CREG2Q8IUH2 290 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 CCDC50Q8IVM0 306 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 NUP93Q8N1F7 819 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 ARFGAP1Q8N6T3 406 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 POF1BQ8WVV4 589 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 HSPH1Q92598 858 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 RNF25Q96BH1 459 aaPredicted RBP11.91□□□□□ -0.5
XRCC4-201ENST00000282268 C8orf48Q96LL4 319 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 TBCBQ99426 244 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 TCF25Q9BQ70 676 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 TUBB2BQ9BVA1 445 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 ZBP1Q9H171 429 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 MYH10P35580 1976 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 H0YGN5 161 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 PRRG1O14668 218 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 TNFRSF10BO14763 440 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 TEX28O15482 410 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 LRCH4O75427 683 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 KRT1P04264 644 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 CTSAP10619 480 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 PRLRP16471 622 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 DESP17661 470 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 DNAJB1P25685 340 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 IL1R2P27930 398 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 MIPP30301 263 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 ELF1P32519 619 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 PGFP49763 221 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 PEX5P50542 639 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 ERVFC1P60507 584 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 CKAP4Q07065 602 aaKnown RBP11.91□□□□□ -0.5
XRCC4-201ENST00000282268 C2orf54Q08AI8 447 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 NME3Q13232 169 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 SMC1AQ14683 1233 aaKnown RBP11.91□□□□□ -0.5
XRCC4-201ENST00000282268 HADHQ16836 314 aaKnown RBP11.91□□□□□ -0.5
XRCC4-201ENST00000282268 KCNT1Q5JUK3 1230 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 SEL1L2Q5TEA6 688 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 SLC7A14Q8TBB6 771 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 POPDC2Q9HBU9 364 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 GMIPQ9P107 970 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 AFF4Q9UHB7 1163 aaKnown RBP11.91□□□□□ -0.5
XRCC4-201ENST00000282268 LCMT1Q9UIC8 334 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 NUDT5Q9UKK9 219 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 YBX2Q9Y2T7 364 aaKnown RBP11.91□□□□□ -0.5
XRCC4-201ENST00000282268 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.91□□□□□ -0.5
XRCC4-201ENST00000282268 NLRC5Q86WI3 1866 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 A0A1W2PQH9 124 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 SLC38A8A6NNN8 435 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 DPYSL4O14531 572 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 PSTPIP1O43586 416 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 CNPP09543 421 aaKnown RBP11.9□□□□□ -0.5
XRCC4-201ENST00000282268 SCNN1AP37088 669 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 MATKP42679 507 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 YWHAGP61981 247 aaKnown RBP eCLIP11.9□□□□□ -0.5
XRCC4-201ENST00000282268 RPL10AP62906 217 aaKnown RBP11.9□□□□□ -0.5
XRCC4-201ENST00000282268 SMARCB1Q12824 385 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 LONRF2Q1L5Z9 754 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 BSPRYQ5W0U4 402 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 BTBD8Q5XKL5 378 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 BHLHA9Q7RTU4 235 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 CEP112Q8N8E3 955 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 NIPA2Q8N8Q9 360 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 ZNF461Q8TAF7 563 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 FNIP1Q8TF40 1166 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 C2orf15Q8WU43 125 aaKnown RBP11.9□□□□□ -0.5
XRCC4-201ENST00000282268 FBXO32Q969P5 355 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 PEBP4Q96S96 227 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 DDX23Q9BUQ8 820 aaKnown RBP11.9□□□□□ -0.5
XRCC4-201ENST00000282268 AP1M1Q9BXS5 423 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 ADAM33Q9BZ11 813 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 NKX2-4Q9H2Z4 354 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 PNPLA8Q9NP80 782 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 GPATCH2LQ9NWQ4 482 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 USP18Q9UMW8 372 aa11.9□□□□□ -0.5
XRCC4-201ENST00000282268 CTAGE15A4D2H0 777 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 HIDE1A8MVS5 230 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 M0QYT0 321 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 GRM6O15303 877 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 SART1O43290 800 aaKnown RBP11.89□□□□□ -0.51
XRCC4-201ENST00000282268 PRPSAP2O60256 369 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 TRUB2O95900 331 aaKnown RBP11.89□□□□□ -0.51
XRCC4-201ENST00000282268 FGGP02679 453 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 FYNP06241 537 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 CTAGE8P0CG41 777 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 ATF6P18850 670 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 KLRC2P26717 231 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 YWHAQP27348 245 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 NOS2P35228 1153 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 TUFMP49411 452 aaKnown RBP11.89□□□□□ -0.51
XRCC4-201ENST00000282268 SLC25A11Q02978 314 aaKnown RBP11.89□□□□□ -0.51
XRCC4-201ENST00000282268 RAB33AQ14088 237 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 NAA30Q147X3 362 aaPredicted RBP11.89□□□□□ -0.51
XRCC4-201ENST00000282268 TAF12Q16514 161 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 TEX35Q5T0J7 233 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 KAZNQ674X7 775 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 PM20D1Q6GTS8 502 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms