RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 ARMCX3Q9UH62 379 aaPredicted RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 TBK1Q9UHD2 729 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 SCAF8Q9UPN6 1271 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 GDAQ9Y2T3 454 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 CCDC151A5D8V7 595 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 PSMD14O00487 310 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 BNIP3LO60238 219 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 SCGB1D1O95968 90 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 MAPTP10636 758 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 PCP11498 1178 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 IL1R1P14778 569 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 PNLIPP16233 465 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 SMPD1P17405 629 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 NFKB1P19838 968 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 PRDX5P30044 214 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 GUCY1A2P33402 732 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 MAP2K6P52564 334 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 GTF2A1P52655 376 aaPredicted RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 CUL4BQ13620 913 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 COL9A3Q14050 684 aaPredicted RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 KYNUQ16719 465 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 SEL1L2Q5TEA6 688 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 SLFN13Q68D06 897 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 TTC19Q6DKK2 380 aaPredicted RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 ITPRIPL1Q6GPH6 555 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 GALNT17Q6IS24 598 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 RCSD1Q6JBY9 416 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 PGBD2Q6P3X8 592 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 KLHDC10Q6PID8 442 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 FBXO38Q6PIJ6 1188 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 SARM1Q6SZW1 724 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 EPHX4Q8IUS5 362 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 DHX40Q8IX18 779 aaKnown RBP3.07□□□□□ -1.92
HERC4-201ENST00000277817 RCBTB1Q8NDN9 531 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 OR2I1PQ8NGU4 316 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 NEDD1Q8NHV4 660 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 CCT6BQ92526 530 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 MRGPRX4Q96LA9 322 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 CCDC74BQ96LY2 380 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 SAMD11Q96NU1 681 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 EPC1Q9H2F5 836 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 LY9Q9HBG7 655 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 OBP2BQ9NPH6 170 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 AASSQ9UDR5 926 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 MINPP1Q9UNW1 487 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 NUMBLQ9Y6R0 609 aa3.07□□□□□ -1.92
HERC4-201ENST00000277817 TCP10L2B9ZVM9 353 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 MEIS1O00470 390 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 KRIT1O00522 736 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 ATP2A1O14983 1001 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 ATXN7O15265 892 aaPredicted RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 TEX33O43247 280 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 GJB3O75712 270 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 CYP19A1P11511 503 aaPredicted RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 ALDH1B1P30837 517 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 LIMK1P53667 647 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 MRPS25P82663 173 aaKnown RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 NCBP1Q09161 790 aaKnown RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 C17orf67Q0P5P2 114 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 KRT31Q15323 416 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 DLGAP5Q15398 846 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 PLA2G4EQ3MJ16 856 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 RABL6Q3YEC7 729 aaPredicted RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 TTC31Q49AM3 519 aaPredicted RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 KCTD16Q68DU8 428 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 POMZP3Q6PJE2 187 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 SHC4Q6S5L8 630 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 RPAINQ86UA6 219 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 CCDC105Q8IYK2 499 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 ADSSL1Q8N142 457 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 UBL4BQ8N7F7 174 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 SMCR8Q8TEV9 937 aaPredicted RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 LARP4BQ92615 738 aaKnown RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 KIFAP3Q92845 792 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 CELF1Q92879 486 aaKnown RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 P2RX5Q93086 422 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 VMP1Q96GC9 406 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 ZDHHC15Q96MV8 337 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 NAP1L3Q99457 506 aaPredicted RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 NUCKS1Q9H1E3 243 aaKnown RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 SH2D4AQ9H788 454 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 POLD4Q9HCU8 107 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 PRDM8Q9NQV8 689 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 TSPAN3O60637 253 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 CLASP2O75122 1294 aaKnown RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 C22orf31O95567 290 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 GNA14O95837 355 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 PLATP00750 562 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 TK1P04183 234 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 ALAS1P13196 640 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 NPTX2P47972 431 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 GUCY2DQ02846 1103 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 IFT88Q13099 833 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 PLCL1Q15111 1095 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 CNGA2Q16280 664 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 NAA35Q5VZE5 725 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 MFSD5Q6N075 450 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 FBXO11Q86XK2 927 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 RIOX2Q8IUF8 465 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 SLC44A5Q8NCS7 719 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms