RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 LYPLA2O95372 231 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 VDRP11473 427 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 AQP5P55064 265 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 RABGAP1LQ5R372 815 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 DENND5BQ6ZUT9 1274 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 OTOAQ7RTW8 1153 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 POU5F2Q8N7G0 328 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 CCNYL1Q8N7R7 359 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 PIP4K2CQ8TBX8 421 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 EXT2Q93063 718 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 TUBB6Q9BUF5 446 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 SHOC2Q9UQ13 582 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 MYH11P35749 1972 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 FAM237BA0A1B0GVD1 139 aa20.58■□□□□ 0.88
CSPG5-201ENST00000264723 HMBSP08397 361 aa20.58■□□□□ 0.88
CSPG5-201ENST00000264723 PAEPP09466 180 aa20.58■□□□□ 0.88
CSPG5-201ENST00000264723 ABCG1P45844 678 aa20.58■□□□□ 0.88
CSPG5-201ENST00000264723 C16orf46Q6P387 395 aa20.58■□□□□ 0.88
CSPG5-201ENST00000264723 MON1BQ7L1V2 547 aa20.58■□□□□ 0.88
CSPG5-201ENST00000264723 CDKL3Q8IVW4 592 aaPredicted RBP20.58■□□□□ 0.88
CSPG5-201ENST00000264723 ALLCQ8N6M5 410 aa20.58■□□□□ 0.88
CSPG5-201ENST00000264723 BFARQ9NZS9 450 aa20.58■□□□□ 0.88
CSPG5-201ENST00000264723 RRN3P2A6NIE6 340 aa20.58■□□□□ 0.88
CSPG5-201ENST00000264723 C4BPAP04003 597 aaKnown RBP20.58■□□□□ 0.88
CSPG5-201ENST00000264723 UNGP13051 313 aaPredicted RBP20.58■□□□□ 0.88
CSPG5-201ENST00000264723 NCAM1P13591 858 aa20.58■□□□□ 0.88
CSPG5-201ENST00000264723 TPI1P60174 286 aa20.58■□□□□ 0.88
CSPG5-201ENST00000264723 MFSD5Q6N075 450 aa20.58■□□□□ 0.88
CSPG5-201ENST00000264723 CDT1Q9H211 546 aa20.58■□□□□ 0.88
CSPG5-201ENST00000264723 KDELR1P24390 212 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 RBL1P28749 1068 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 TAF6P49848 677 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 LACTB2Q53H82 288 aaPredicted RBP20.57■□□□□ 0.88
CSPG5-201ENST00000264723 C12orf29Q8N999 325 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 TFAP2BQ92481 460 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 TRIM4Q9C037 500 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 hCG_1818297A0A087WSY0 165 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 TMEM191CA6NGB0 347 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 CD4P01730 458 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 RAB3IL1Q8TBN0 382 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 C5orf60A6NFR6 353 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 MMP8P22894 467 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 RASA2Q15283 850 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 EML3Q32P44 896 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 MTBPQ96DY7 904 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 CCDC68Q9H2F9 335 aa20.57■□□□□ 0.88
CSPG5-201ENST00000264723 UBQLN1Q9UMX0 589 aaKnown RBP20.57■□□□□ 0.88
CSPG5-201ENST00000264723 E5RJQ4 531 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 M0QYT0 321 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 GRIK1P39086 918 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 THPOP40225 353 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 GDF10P55107 478 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 RPL10AP62906 217 aaKnown RBP20.56■□□□□ 0.88
CSPG5-201ENST00000264723 KLC1Q07866 573 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 PTPN20Q4JDL3 420 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 RNF135Q8IUD6 432 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 ALKBH8Q96BT7 664 aaKnown RBP20.56■□□□□ 0.88
CSPG5-201ENST00000264723 VCPIP1Q96JH7 1222 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 UNKQ9C0B0 810 aaKnown RBP20.56■□□□□ 0.88
CSPG5-201ENST00000264723 VCX3BQ9H321 246 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 PAK5Q9P286 719 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 DGKIO75912 1065 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 CUL3Q13618 768 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 BTBD8Q5XKL5 378 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 RFWD2Q8NHY2 731 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 PDCD6IPQ8WUM4 868 aaKnown RBP20.56■□□□□ 0.88
CSPG5-201ENST00000264723 SPON2Q9BUD6 331 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 WWP1Q9H0M0 922 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 SLC24A2Q9UI40 661 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 MAFO75444 373 aaPredicted RBP20.56■□□□□ 0.88
CSPG5-201ENST00000264723 DPYSL3Q14195 570 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 STILQ15468 1287 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 FNBP1LQ5T0N5 605 aa20.56■□□□□ 0.88
CSPG5-201ENST00000264723 L3MBTL3Q96JM7 780 aaPredicted RBP20.56■□□□□ 0.88
CSPG5-201ENST00000264723 HMGCRP04035 888 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 RPS6KA2Q15349 733 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 MTMR14Q8NCE2 650 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 FSD1LQ9BXM9 530 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 RNPEPQ9H4A4 650 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 NDE1Q9NXR1 346 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 ANGPTL2Q9UKU9 493 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 AFG3L2Q9Y4W6 797 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 CNTNAP1P78357 1384 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 PTPRJQ12913 1337 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 MEI4A8MW99 385 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 FCHO1O14526 889 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 VNN1O95497 513 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 SERPINB4P48594 390 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 KPNB1Q14974 876 aaKnown RBP20.55■□□□□ 0.88
CSPG5-201ENST00000264723 BOLA3Q53S33 107 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 ADAM32Q8TC27 787 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 SRPK1Q96SB4 655 aaKnown RBP20.55■□□□□ 0.88
CSPG5-201ENST00000264723 DDIT4Q9NX09 232 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 MICAL2O94851 1124 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 FSTL1Q12841 308 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 ACO2Q99798 780 aaKnown RBP20.55■□□□□ 0.88
CSPG5-201ENST00000264723 RRAGCQ9HB90 399 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 AAASQ9NRG9 546 aa20.55■□□□□ 0.88
CSPG5-201ENST00000264723 MTO1Q9Y2Z2 717 aaKnown RBP20.55■□□□□ 0.88
CSPG5-201ENST00000264723 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms