RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TIGD7Q6NT04 549 aaPredicted RBP14.47□□□□□ -0.09
CDH3-201ENST00000264012 SEPT8Q92599 483 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 DACT3Q96B18 629 aaPredicted RBP14.47□□□□□ -0.09
CDH3-201ENST00000264012 MTBPQ96DY7 904 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 LOC100653049A0A140TA62 436 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 KRT34O76011 436 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 GHRP10912 638 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 INPP1P49441 399 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 PDCD2Q16342 344 aaPredicted RBP14.47□□□□□ -0.09
CDH3-201ENST00000264012 IQSEC1Q6DN90 963 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 COPS5Q92905 334 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 TSPYL2Q9H2G4 693 aaPredicted RBP14.47□□□□□ -0.09
CDH3-201ENST00000264012 RRAGCQ9HB90 399 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 SHOC2Q9UQ13 582 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 ATP9AO75110 1047 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 AXLP30530 894 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 PSEN2P49810 448 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 ADIGQ0VDE8 80 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 MRNIPQ6NTE8 343 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 SLC26A11Q86WA9 606 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 AAASQ9NRG9 546 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 PHTF1Q9UMS5 762 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 SIGLEC1Q9BZZ2 1709 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 SLC12A8A0AV02 714 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 APOA4P06727 396 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 RAB27AP51159 221 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 YWHAZP63104 245 aaKnown RBP14.47□□□□□ -0.09
CDH3-201ENST00000264012 KCNMA1Q12791 1236 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 PRPF39Q86UA1 669 aaKnown RBP14.47□□□□□ -0.09
CDH3-201ENST00000264012 EDEM1Q92611 657 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 OSBPL1AQ9BXW6 950 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 KDM4CQ9H3R0 1056 aa14.47□□□□□ -0.09
CDH3-201ENST00000264012 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.47□□□□□ -0.09
CDH3-201ENST00000264012 WARS2Q9UGM6 360 aaKnown RBP14.47□□□□□ -0.09
CDH3-201ENST00000264012 TIMM44O43615 452 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 RALBP11234 206 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 TMEM132BQ14DG7 1078 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 SCUBE3Q8IX30 993 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 KCTD10Q9H3F6 313 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 CXorf56Q9H5V9 222 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 MRGBPQ9NV56 204 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 SLC24A2Q9UI40 661 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 PFDN1O60925 122 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 GJB6O95452 261 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 WDR59Q6PJI9 974 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 ZDHHC17Q8IUH5 632 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 C4orf32Q8N8J7 132 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 ACP6Q9NPH0 428 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 KCND1Q9NSA2 647 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 VPS9D1Q9Y2B5 631 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 NFAT5O94916 1531 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 ANKRD26Q9UPS8 1709 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 RPL21P46778 160 aaKnown RBP14.46□□□□□ -0.09
CDH3-201ENST00000264012 SKIV2LQ15477 1246 aaKnown RBP14.46□□□□□ -0.09
CDH3-201ENST00000264012 SLC9A9Q8IVB4 645 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 PCYOX1LQ8NBM8 494 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 GANQ9H2C0 597 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 CRLS1Q9UJA2 301 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 MROH7Q68CQ1 1323 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 CNTNAP2Q9UHC6 1331 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 BCL9LQ86UU0 1499 aa14.46□□□□□ -0.09
CDH3-201ENST00000264012 NFASCO94856 1347 aa14.46□□□□□ -0.1
CDH3-201ENST00000264012 EIF4E1BA6NMX2 242 aaKnown RBP14.46□□□□□ -0.1
CDH3-201ENST00000264012 PRPF4O43172 522 aaKnown RBP eCLIP14.46□□□□□ -0.1
CDH3-201ENST00000264012 HMGCRP04035 888 aa14.46□□□□□ -0.1
CDH3-201ENST00000264012 RAB42Q8N4Z0 105 aa14.46□□□□□ -0.1
CDH3-201ENST00000264012 C3orf20Q8ND61 904 aa14.46□□□□□ -0.1
CDH3-201ENST00000264012 SLC2A14Q8TDB8 520 aa14.46□□□□□ -0.1
CDH3-201ENST00000264012 SOCS4Q8WXH5 440 aa14.46□□□□□ -0.1
CDH3-201ENST00000264012 RUBCNLQ9H714 662 aa14.46□□□□□ -0.1
CDH3-201ENST00000264012 TRPM5Q9NZQ8 1165 aa14.46□□□□□ -0.1
CDH3-201ENST00000264012 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.45□□□□□ -0.1
CDH3-201ENST00000264012 EGFRP00533 1210 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 CKMP06732 381 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 EEF1DP29692 281 aaKnown RBP14.45□□□□□ -0.1
CDH3-201ENST00000264012 CPA2P48052 419 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 FSCN1Q16658 493 aaKnown RBP14.45□□□□□ -0.1
CDH3-201ENST00000264012 SHROOM1Q2M3G4 852 aaPredicted RBP14.45□□□□□ -0.1
CDH3-201ENST00000264012 LRRC23Q53EV4 343 aaPredicted RBP14.45□□□□□ -0.1
CDH3-201ENST00000264012 IFNEQ86WN2 208 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 COLGALT1Q8NBJ5 622 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 NSL1Q96IY1 281 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 APOL5Q9BWW9 433 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 TAS2R14Q9NYV8 317 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 DCDC2Q9UHG0 476 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 C2orf81A6NN90 581 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 NCAM2O15394 837 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 MBL2P11226 248 aaPredicted RBP14.45□□□□□ -0.1
CDH3-201ENST00000264012 ATN1P54259 1190 aaPredicted RBP14.45□□□□□ -0.1
CDH3-201ENST00000264012 DGKZQ13574 1117 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 INPP5AQ14642 412 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 AGAP9Q5VTM2 703 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 C16orf89Q6UX73 402 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 NUP93Q8N1F7 819 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 SPATA20Q8TB22 786 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 MRPS31Q92665 395 aaKnown RBP14.45□□□□□ -0.1
CDH3-201ENST00000264012 MAGEB18Q96M61 343 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 ILKAPQ9H0C8 392 aaPredicted RBP14.45□□□□□ -0.1
CDH3-201ENST00000264012 A0A0U1RQJ8 604 aa14.45□□□□□ -0.1
CDH3-201ENST00000264012 SYCE1LA8MT33 242 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms