RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SCUBE3Q8IX30 993 aa19.28■□□□□ 0.68
SDF4-201ENST00000263741 ARL14EPQ8N8R7 260 aaPredicted RBP19.28■□□□□ 0.68
SDF4-201ENST00000263741 FGF14Q92915 247 aa19.28■□□□□ 0.68
SDF4-201ENST00000263741 AGPAT1Q99943 283 aa19.28■□□□□ 0.68
SDF4-201ENST00000263741 LHX5Q9H2C1 402 aa19.28■□□□□ 0.68
SDF4-201ENST00000263741 HAUS4Q9H6D7 363 aa19.28■□□□□ 0.68
SDF4-201ENST00000263741 AIPL1Q9NZN9 384 aa19.28■□□□□ 0.68
SDF4-201ENST00000263741 CEP83Q9Y592 693 aa19.28■□□□□ 0.68
SDF4-201ENST00000263741 ZBED1O96006 694 aa19.27■□□□□ 0.68
SDF4-201ENST00000263741 ERBB2P04626 1255 aa19.27■□□□□ 0.68
SDF4-201ENST00000263741 PARM1Q6UWI2 310 aa19.27■□□□□ 0.68
SDF4-201ENST00000263741 HFE2Q6ZVN8 426 aa19.27■□□□□ 0.68
SDF4-201ENST00000263741 CCDC186Q7Z3E2 898 aa19.27■□□□□ 0.68
SDF4-201ENST00000263741 SLC30A5Q8TAD4 765 aa19.27■□□□□ 0.68
SDF4-201ENST00000263741 MRFAP1L1Q96HT8 127 aa19.27■□□□□ 0.68
SDF4-201ENST00000263741 PPP1R13BQ96KQ4 1090 aa19.27■□□□□ 0.68
SDF4-201ENST00000263741 KXD1Q9BQD3 176 aa19.27■□□□□ 0.68
SDF4-201ENST00000263741 RPP25Q9BUL9 199 aaKnown RBP19.27■□□□□ 0.68
SDF4-201ENST00000263741 SLC4A5Q9BY07 1137 aa19.27■□□□□ 0.68
SDF4-201ENST00000263741 TASP1Q9H6P5 420 aa19.27■□□□□ 0.68
SDF4-201ENST00000263741 PRKAG3Q9UGI9 489 aa19.27■□□□□ 0.68
SDF4-201ENST00000263741 NAGPAQ9UK23 515 aa19.27■□□□□ 0.68
SDF4-201ENST00000263741 YJEFN3A6XGL0 299 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 E7ENQ6 273 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 VIPR2P41587 438 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 KLHL30Q0D2K2 578 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 TDRD12Q587J7 1177 aaKnown RBP19.26■□□□□ 0.67
SDF4-201ENST00000263741 ZNF571Q7Z3V5 609 aaPredicted RBP19.26■□□□□ 0.67
SDF4-201ENST00000263741 ZNF677Q86XU0 584 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 DNAAF5Q86Y56 855 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 TMEM35BQ8NCS4 154 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 ZNF397Q8NF99 534 aaPredicted RBP19.26■□□□□ 0.67
SDF4-201ENST00000263741 MYRIPQ8NFW9 859 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 RSPRY1Q96DX4 576 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 HSFY1Q96LI6 401 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 ZNF830Q96NB3 372 aaPredicted RBP19.26■□□□□ 0.67
SDF4-201ENST00000263741 ASB16Q96NS5 453 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 SYT11Q9BT88 431 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 TLR8Q9NR97 1041 aaKnown RBP19.26■□□□□ 0.67
SDF4-201ENST00000263741 EPS15L1Q9UBC2 864 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 CCL26Q9Y258 94 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 TICRRQ7Z2Z1 1910 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 MDM4O15151 490 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 PAPSS1O43252 624 aaPredicted RBP19.26■□□□□ 0.67
SDF4-201ENST00000263741 MFAP3LO75121 409 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 CKMP06732 381 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 ZDHHC11BP0C7U3 371 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 FCARP24071 287 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 DAOAP59103 153 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 TBX2Q13207 712 aaPredicted RBP19.26■□□□□ 0.67
SDF4-201ENST00000263741 TRIM14Q14142 442 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 HGSNATQ68CP4 663 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 SMYD5Q6GMV2 418 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.26■□□□□ 0.67
SDF4-201ENST00000263741 PDZD8Q8NEN9 1154 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 RNF38Q9H0F5 515 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 COMMD8Q9NX08 183 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 GDE1Q9NZC3 331 aa19.26■□□□□ 0.67
SDF4-201ENST00000263741 TBX18O95935 607 aa19.25■□□□□ 0.67
SDF4-201ENST00000263741 CDH5P33151 784 aaPredicted RBP19.25■□□□□ 0.67
SDF4-201ENST00000263741 MON1AQ86VX9 555 aa19.25■□□□□ 0.67
SDF4-201ENST00000263741 ARID3BQ8IVW6 561 aaPredicted RBP19.25■□□□□ 0.67
SDF4-201ENST00000263741 CMTM8Q8IZV2 173 aa19.25■□□□□ 0.67
SDF4-201ENST00000263741 EDEM1Q92611 657 aa19.25■□□□□ 0.67
SDF4-201ENST00000263741 IQCDQ96DY2 449 aa19.25■□□□□ 0.67
SDF4-201ENST00000263741 SMOC2Q9H3U7 446 aa19.25■□□□□ 0.67
SDF4-201ENST00000263741 SYNCQ9H7C4 482 aa19.25■□□□□ 0.67
SDF4-201ENST00000263741 CNGB3Q9NQW8 809 aa19.25■□□□□ 0.67
SDF4-201ENST00000263741 SMPD4Q9NXE4 827 aa19.25■□□□□ 0.67
SDF4-201ENST00000263741 NUMBLQ9Y6R0 609 aa19.25■□□□□ 0.67
SDF4-201ENST00000263741 TRAV19A0A0A6YYK7 116 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 C19orf67A6NJJ6 358 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 COCHO43405 550 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 TLR5O60602 858 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 OAS1P00973 400 aaKnown RBP19.24■□□□□ 0.67
SDF4-201ENST00000263741 CYP1A1P04798 512 aaPredicted RBP19.24■□□□□ 0.67
SDF4-201ENST00000263741 CCDC172P0C7W6 258 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 PRKCIP41743 596 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 RPL34P49207 117 aaKnown RBP19.24■□□□□ 0.67
SDF4-201ENST00000263741 YWHAGP61981 247 aaKnown RBP eCLIP19.24■□□□□ 0.67
SDF4-201ENST00000263741 HTR4Q13639 388 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 PM20D1Q6GTS8 502 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 TANGO2Q6ICL3 276 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 FAM183BPQ6ZVS7 135 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 PHLDB2Q86SQ0 1253 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 RIN3Q8TB24 985 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 STK32AQ8WU08 396 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 OVCA2Q8WZ82 227 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 SMARCD2Q92925 531 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 UHRF1Q96T88 793 aaPredicted RBP19.24■□□□□ 0.67
SDF4-201ENST00000263741 TAS2R14Q9NYV8 317 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 TMCO5BA8MYB1 307 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 SCAMP3O14828 347 aaKnown RBP19.24■□□□□ 0.67
SDF4-201ENST00000263741 LSM8O95777 96 aaKnown RBP19.24■□□□□ 0.67
SDF4-201ENST00000263741 HDCP19113 662 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 AVPR1AP37288 418 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 TAF5Q15542 800 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 MMS22LQ6ZRQ5 1243 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 TMEM110Q86TL2 294 aa19.24■□□□□ 0.67
SDF4-201ENST00000263741 ZDHHC14Q8IZN3 488 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms