RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 SIX4Q9UIU6 781 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 CNTN6Q9UQ52 1028 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 MFHAS1Q9Y4C4 1052 aa9.51□□□□□ -0.89
MSH4-201ENST00000263187 MYO18AQ92614 2054 aaKnown RBP9.51□□□□□ -0.89
MSH4-201ENST00000263187 LACTBL1A8MY62 500 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 LYPLA1O75608 230 aaPredicted RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 ATP5HO75947 161 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 USP1O94782 785 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 TRUB2O95900 331 aaKnown RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 LINGO3P0C6S8 592 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 EIF4BP23588 611 aaKnown RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 RFC5P40937 340 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 GHRHRQ02643 423 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 MAP3K10Q02779 954 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 BST1Q10588 318 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 PARP6Q2NL67 630 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 LRRC38Q5VT99 294 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 CCDC62Q6P9F0 684 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 DRICH1Q6PGQ1 229 aaPredicted RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 CES3Q6UWW8 571 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 TREML1Q86YW5 311 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 HACE1Q8IYU2 909 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 POU5F2Q8N7G0 328 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 SLC4A11Q8NBS3 891 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 BTBD10Q9BSF8 475 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 THTPAQ9BU02 230 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 FOXP3Q9BZS1 431 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 MAP3K20Q9NYL2 800 aaKnown RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 COL2A1P02458 1487 aaPredicted RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 DICER1Q9UPY3 1922 aaKnown RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 IQANK1A0A1B0GTG1 560 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 GPR25O00155 361 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 CCDC22O60826 627 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 TBX10O75333 385 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 SORBS2O94875 1100 aaKnown RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 LSM8O95777 96 aaKnown RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 UBTFL6P0CB48 400 aaPredicted RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 PGM1P36871 562 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 AQP5P55064 265 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 RNF220Q5VTB9 566 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 CEP128Q6ZU80 1094 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 POLNQ7Z5Q5 900 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 ZBTB8OSQ8IWT0 167 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 FBXO16Q8IX29 292 aaPredicted RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 UBR7Q8N806 425 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 SCG3Q8WXD2 468 aaKnown RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 STMN2Q93045 179 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 ZBED3Q96IU2 234 aaPredicted RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 EBF4Q9BQW3 602 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 APOL6Q9BWW8 343 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 BTBD7Q9P203 1132 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 ZFATQ9P243 1243 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 CPSF3Q9UKF6 684 aaKnown RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 PACSIN3Q9UKS6 424 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 MRPL42Q9Y6G3 142 aaKnown RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 SBF1O95248 1867 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 APOC4-APOC2K7ER74 178 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 NVLO15381 856 aaKnown RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 PRPSAP2O60256 369 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 APOC2P02655 101 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 DLDP09622 509 aaKnown RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 ABCG1P45844 678 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 GTF2A2P52657 109 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 PTPN11Q06124 597 aaPredicted RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 TMEM62Q0P6H9 643 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 OLIG2Q13516 323 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 EML3Q32P44 896 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 GADL1Q6ZQY3 521 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 CATSPERGQ6ZRH7 1159 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 FAM183BPQ6ZVS7 135 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 PCGF5Q86SE9 256 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 RSPH3Q86UC2 560 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 TEX2Q8IWB9 1127 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 NDUFAF2Q8N183 169 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 PPP1R14CQ8TAE6 165 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 INPP5DQ92835 1189 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 MOCOSQ96EN8 888 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 OXNAD1Q96HP4 312 aaPredicted RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 PPP1R36Q96LQ0 422 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 RPF1Q9H9Y2 349 aaKnown RBP9.5□□□□□ -0.89
MSH4-201ENST00000263187 PSME4Q14997 1843 aa9.5□□□□□ -0.89
MSH4-201ENST00000263187 NFASCO94856 1347 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 SOWAHBA6NEL2 793 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 KIF1CO43896 1103 aaKnown RBP9.49□□□□□ -0.89
MSH4-201ENST00000263187 ATG7O95352 703 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 ZBED1O96006 694 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 VTNP04004 478 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 MYCNP04198 464 aaPredicted RBP9.49□□□□□ -0.89
MSH4-201ENST00000263187 ZCCHC18P0CG32 403 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 CSH1P0DML2 217 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 CSH2P0DML3 217 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 BCAR1P56945 870 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 BLMHQ13867 455 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 CCDC142Q17RM4 750 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 EFCAB12Q6NXP0 572 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 CFAP61Q8NHU2 1237 aa9.49□□□□□ -0.89
MSH4-201ENST00000263187 NDRG1Q92597 394 aaKnown RBP9.49□□□□□ -0.89
MSH4-201ENST00000263187 CCDC124Q96CT7 223 aaKnown RBP9.49□□□□□ -0.89
MSH4-201ENST00000263187 PDGFCQ9NRA1 345 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms