RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 PRELID2Q8N945 189 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 CFAP36Q96G28 342 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 FAN1Q9Y2M0 1017 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 PRPF4O43172 522 aaKnown RBP eCLIP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 ATP5HO75947 161 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 ITGAVP06756 1048 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 RALAP11233 206 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 WARSP23381 471 aaKnown RBP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 HCAR3P49019 387 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 GNGT1P63211 74 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 DLG4P78352 724 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 VEPH1Q14D04 833 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 CCDC38Q502W7 563 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 TTC19Q6DKK2 380 aaPredicted RBP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 TMEM110Q86TL2 294 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 SRRM1Q8IYB3 904 aaKnown RBP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 KCTD13Q8WZ19 329 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 C16orf70Q9BSU1 422 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 HMX1Q9NP08 348 aaPredicted RBP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 SSU72Q9NP77 194 aaKnown RBP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 OSGEPQ9NPF4 335 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 DPP7Q9UHL4 492 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 PLAAQ9Y263 795 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 PTPN22Q9Y2R2 807 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 COL4A1P02462 1669 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 EXOC1LA0A1B0GW35 172 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 DAB1O75553 588 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 RECQL4O94761 1208 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 SUN1O94901 812 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 BRMS1LQ5PSV4 323 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 ILDR2Q71H61 639 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 PLEKHO2Q8TD55 490 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 PYROXD1Q8WU10 500 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 AP1M1Q9BXS5 423 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 PPP1R12CQ9BZL4 782 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 UPF3AQ9H1J1 476 aaKnown RBP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 MRPL46Q9H2W6 279 aaKnown RBP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 ZMYM5Q9UJ78 669 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 XPO1O14980 1071 aaKnown RBP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 TTI1O43156 1089 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 INHBAP08476 426 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 GUCY2FP51841 1108 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 LMBRD2Q68DH5 695 aaPredicted RBP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 NLRP9Q7RTR0 991 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 MTBPQ96DY7 904 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 CFHR5Q9BXR6 569 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 SRRDQ9UH36 339 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 TSPAN16Q9UKR8 245 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 ANKRD31Q8N7Z5 1873 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 MAGEB16A2A368 324 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 PDE2AO00408 941 aaPredicted RBP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 CST8O60676 142 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 OPHN1O60890 802 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 CA4P22748 312 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 CCT5P48643 541 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 PHEXP78562 749 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 E2F5Q15329 346 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 HIF1AQ16665 826 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 CDO1Q16878 200 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 DEFB115Q30KQ5 88 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 PPP1R15BQ5SWA1 713 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 MORN1Q5T089 497 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 C1orf220Q5T0J3 134 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 LCA5Q86VQ0 697 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 ADGRF2Q8IZF7 708 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 SPPL2BQ8TCT7 592 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 BCAS4Q8TDM0 211 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 HSPH1Q92598 858 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 SMARCD1Q96GM5 515 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 RBM15Q96T37 977 aaKnown RBP eCLIP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 RABEP2Q9H5N1 569 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 DMAP1Q9NPF5 467 aaPredicted RBP8.55□□□□□ -1.04
PTPN3-201ENST00000262539 KLHL14Q9P2G3 628 aa8.55□□□□□ -1.04
PTPN3-201ENST00000262539 DDX3YO15523 660 aaKnown RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 SLC18A1P54219 525 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 HABP4Q5JVS0 413 aaKnown RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 SDE2Q6IQ49 451 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 LINC00523Q86TU6 105 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 GPR65Q8IYL9 337 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 NR1H4Q96RI1 486 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 DCDC2CA8MYV0 355 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 SOCS7O14512 581 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 SEC31AO94979 1220 aaKnown RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 SNUPNO95149 360 aaKnown RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 MSH2P43246 934 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 CARSP49589 748 aaKnown RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 PRKCQQ04759 706 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 SERINC5Q86VE9 423 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 UBR7Q8N806 425 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 KAT5Q92993 513 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 MCEEQ96PE7 176 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 NUDCD1Q96RS6 583 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 PCDHB18PQ96TA0 734 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 OSMRQ99650 979 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 CATSPERBQ9H7T0 1116 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 SNAI1O95863 264 aaPredicted RBP8.54□□□□□ -1.04
PTPN3-201ENST00000262539 SLC10A6Q3KNW5 377 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 DCLRE1AQ6PJP8 1040 aa8.54□□□□□ -1.04
PTPN3-201ENST00000262539 ZBTB45Q96K62 511 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms