RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 STKLD1Q8NE28 680 aa16.77■□□□□ 0.28
SREBF1-201ENST00000261646 DIS3LQ8TF46 1054 aaKnown RBP16.77■□□□□ 0.28
SREBF1-201ENST00000261646 LENG1Q96BZ8 264 aaPredicted RBP16.77■□□□□ 0.28
SREBF1-201ENST00000261646 ZNF333Q96JL9 665 aa16.77■□□□□ 0.28
SREBF1-201ENST00000261646 JPH1Q9HDC5 661 aaPredicted RBP16.77■□□□□ 0.28
SREBF1-201ENST00000261646 PALMDQ9NP74 551 aa16.77■□□□□ 0.28
SREBF1-201ENST00000261646 TCF7L2Q9NQB0 619 aa16.77■□□□□ 0.28
SREBF1-201ENST00000261646 FRMPD4Q14CM0 1322 aa16.77■□□□□ 0.28
SREBF1-201ENST00000261646 ABCC6O95255 1503 aa16.77■□□□□ 0.28
SREBF1-201ENST00000261646 ALOX15BO15296 676 aa16.77■□□□□ 0.27
SREBF1-201ENST00000261646 GCNT1Q02742 428 aa16.77■□□□□ 0.27
SREBF1-201ENST00000261646 NME3Q13232 169 aa16.77■□□□□ 0.27
SREBF1-201ENST00000261646 DCAF12L1Q5VU92 463 aa16.77■□□□□ 0.27
SREBF1-201ENST00000261646 GADL1Q6ZQY3 521 aa16.77■□□□□ 0.27
SREBF1-201ENST00000261646 PIWIL2Q8TC59 973 aaKnown RBP16.77■□□□□ 0.27
SREBF1-201ENST00000261646 RGPD2P0DJD1 1756 aa16.77■□□□□ 0.27
SREBF1-201ENST00000261646 CHEK2O96017 543 aa16.77■□□□□ 0.27
SREBF1-201ENST00000261646 GPD1P21695 349 aa16.77■□□□□ 0.27
SREBF1-201ENST00000261646 XKR3Q5GH77 459 aa16.77■□□□□ 0.27
SREBF1-201ENST00000261646 SNRNP48Q6IEG0 339 aaKnown RBP16.77■□□□□ 0.27
SREBF1-201ENST00000261646 CDR2LQ86X02 465 aaPredicted RBP16.77■□□□□ 0.27
SREBF1-201ENST00000261646 FLAD1Q8NFF5 587 aa16.77■□□□□ 0.27
SREBF1-201ENST00000261646 NCLNQ969V3 563 aa16.77■□□□□ 0.27
SREBF1-201ENST00000261646 FAM84AQ96KN4 292 aa16.77■□□□□ 0.27
SREBF1-201ENST00000261646 ACSS3Q9H6R3 686 aa16.77■□□□□ 0.27
SREBF1-201ENST00000261646 ANKEF1Q9NU02 776 aa16.77■□□□□ 0.27
SREBF1-201ENST00000261646 GLRBP48167 497 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 CLEC4FQ8N1N0 589 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 ZSCAN18Q8TBC5 510 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-201ENST00000261646 GIPC2Q8TF65 315 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 DGCR14Q96DF8 476 aaKnown RBP16.76■□□□□ 0.27
SREBF1-201ENST00000261646 ATP11BQ9Y2G3 1177 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 DCCP43146 1447 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 ASMTLO95671 621 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 PYGLP06737 847 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 TRPC1P48995 793 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 JAM2P57087 298 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 PRKCEQ02156 737 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 STRIP1Q5VSL9 837 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 LRRC8BQ6P9F7 803 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 KDELC2Q7Z4H8 507 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 PATL1Q86TB9 770 aaKnown RBP16.76■□□□□ 0.27
SREBF1-201ENST00000261646 SNX32Q86XE0 403 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 PIH1D1Q9NWS0 290 aaKnown RBP16.76■□□□□ 0.27
SREBF1-201ENST00000261646 SERPINE1P05121 402 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 ADORA2BP29275 332 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 GALK1P51570 392 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 BAATQ14032 418 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-201ENST00000261646 SEL1L3Q68CR1 1132 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 LRRC15Q8TF66 581 aa16.76■□□□□ 0.27
SREBF1-201ENST00000261646 RMND5BQ96G75 393 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-201ENST00000261646 DEAF1O75398 565 aaPredicted RBP16.75■□□□□ 0.27
SREBF1-201ENST00000261646 SRP72O76094 671 aaKnown RBP16.75■□□□□ 0.27
SREBF1-201ENST00000261646 RAB27AP51159 221 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 USP46P62068 366 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 FOLH1Q04609 750 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 FOXD4Q12950 439 aaPredicted RBP16.75■□□□□ 0.27
SREBF1-201ENST00000261646 STX5Q13190 355 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 RINLQ6ZS11 566 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 TTC7BQ86TV6 843 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 CERS5Q8N5B7 392 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 TTLL6Q8N841 843 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 OR6P1Q8NGX9 317 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 FRMD8P1Q9BZ68 369 aaPredicted RBP16.75■□□□□ 0.27
SREBF1-201ENST00000261646 FAM49BQ9NUQ9 324 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 USP18Q9UMW8 372 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 UMODL1Q5DID0 1318 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 AFDNP55196 1824 aaKnown RBP16.75■□□□□ 0.27
SREBF1-201ENST00000261646 PRPF4O43172 522 aaKnown RBP eCLIP16.75■□□□□ 0.271e-6■■■□□ 15.5
SREBF1-201ENST00000261646 LCP1P13796 627 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 RPL22P35268 128 aaKnown RBP16.75■□□□□ 0.27
SREBF1-201ENST00000261646 GRIK3Q13003 919 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 BOLA3Q53S33 107 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 ZBTB41Q5SVQ8 909 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 PCYOX1LQ8NBM8 494 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 FSD1LQ9BXM9 530 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 PAMP19021 973 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 MLH1P40692 756 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 CCNFP41002 786 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 EMC2Q15006 297 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 ALLCQ8N6M5 410 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 CYLDQ9NQC7 956 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 FBXO40Q9UH90 709 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 CLEC11AQ9Y240 323 aa16.75■□□□□ 0.27
SREBF1-201ENST00000261646 ZNF189O75820 626 aaPredicted RBP16.74■□□□□ 0.27
SREBF1-201ENST00000261646 MUTP22033 750 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 ATICP31939 592 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 RPL7AP62424 266 aaKnown RBP16.74■□□□□ 0.27
SREBF1-201ENST00000261646 MRPS15P82914 257 aaKnown RBP16.74■□□□□ 0.27
SREBF1-201ENST00000261646 MAMLD1Q13495 774 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 BMT2Q1RMZ1 405 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 IL31Q6EBC2 164 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 MTMR12Q9C0I1 747 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 SEMA6AQ9H2E6 1030 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 CAPN8A6NHC0 703 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 M0R3G1 203 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 ADRB2P07550 413 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 IL1R1P14778 569 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 UQCRBP14927 111 aa16.74■□□□□ 0.27
SREBF1-201ENST00000261646 CDK7P50613 346 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms