RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 HOXD13P35453 343 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 STAT3P40763 770 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 BFSP1Q12934 665 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 GRM4Q14833 912 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 PRAMEF18Q5VWM3 479 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 POTEBQ6S5H4 581 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 ZSCAN18Q8TBC5 510 aaPredicted RBP13.44□□□□□ -0.26
TMEM260-201ENST00000261556 AGAP3Q96P47 875 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 C17orf80Q9BSJ5 609 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 MTG1Q9BT17 334 aaPredicted RBP13.44□□□□□ -0.26
TMEM260-201ENST00000261556 ABCB10Q9NRK6 738 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 BARHL2Q9NY43 387 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 FEM1BQ9UK73 627 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 FIS1Q9Y3D6 152 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 TDP2O95551 362 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 IFI30P13284 250 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 KRT6CP48668 564 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 DYNLT1P63172 113 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 MAP3K10Q02779 954 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 CENPCQ03188 943 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 GPS1Q13098 491 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 ARL13BQ3SXY8 428 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 EARS2Q5JPH6 523 aaKnown RBP13.44□□□□□ -0.26
TMEM260-201ENST00000261556 PTAR1Q7Z6K3 402 aaPredicted RBP13.44□□□□□ -0.26
TMEM260-201ENST00000261556 MICALL2Q8IY33 904 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 TTC39CQ8N584 583 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 SLC4A11Q8NBS3 891 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 ZNF668Q96K58 619 aaPredicted RBP13.44□□□□□ -0.26
TMEM260-201ENST00000261556 SYNPO2Q9UMS6 1093 aa13.44□□□□□ -0.26
TMEM260-201ENST00000261556 TBKBP1A7MCY6 615 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 WDR64B1ANS9 1081 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 E9PBE3 544 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 PIK3R2O00459 728 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 TIMM44O43615 452 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 ACVR2BQ13705 512 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 CATSPER4Q7RTX7 472 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 ZNF572Q7Z3I7 529 aaPredicted RBP13.43□□□□□ -0.26
TMEM260-201ENST00000261556 APOBEC3FQ8IUX4 373 aaKnown RBP13.43□□□□□ -0.26
TMEM260-201ENST00000261556 BBS5Q8N3I7 341 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 POLR1BQ9H9Y6 1135 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 KCNMB3Q9NPA1 279 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 RPRD1BQ9NQG5 326 aaKnown RBP13.43□□□□□ -0.26
TMEM260-201ENST00000261556 CCDC177Q9NQR7 707 aaPredicted RBP13.43□□□□□ -0.26
TMEM260-201ENST00000261556 NINJ2Q9NZG7 142 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 PMF1-BGLAPU3KQ54 211 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 LMTK2Q8IWU2 1503 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 BAZ2BQ9UIF8 2168 aaKnown RBP13.43□□□□□ -0.26
TMEM260-201ENST00000261556 NFIBO00712 420 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 CRYZL1O95825 349 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 PCSK6P29122 969 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 NUDT2P50583 147 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 IQSEC1Q6DN90 963 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 KIAA1841Q6NSI8 718 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 DENND5BQ6ZUT9 1274 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 PPM1NQ8N819 430 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 TNIP2Q8NFZ5 429 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 NUDT12Q9BQG2 462 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 GBA3Q9H227 469 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 ADAM7Q9H2U9 754 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 ST14Q9Y5Y6 855 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 CEP152O94986 1710 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 SNPHO15079 494 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 GUCY1B2O75343 617 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 FTLP02792 175 aaPredicted RBP13.43□□□□□ -0.26
TMEM260-201ENST00000261556 IL1RL1Q01638 556 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 CHI3L2Q15782 390 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 KCNJ8Q15842 424 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 CMPK2Q5EBM0 449 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 FAM20AQ96MK3 541 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 PSMC3IPQ9P2W1 217 aaPredicted RBP13.43□□□□□ -0.26
TMEM260-201ENST00000261556 SLC7A8Q9UHI5 535 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 MYH8P13535 1937 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 WDR19Q8NEZ3 1342 aa13.43□□□□□ -0.26
TMEM260-201ENST00000261556 IQANK1A0A1B0GTG1 560 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 DNASE1L3Q13609 305 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 MPP2Q14168 576 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 PDK4Q16654 411 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 AGXT2Q9BYV1 514 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 C20orf96Q9NUD7 363 aaPredicted RBP13.42□□□□□ -0.26
TMEM260-201ENST00000261556 DGKBQ9Y6T7 804 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 ABCB11O95342 1321 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 NEMP1O14524 444 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 PEX14O75381 377 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 EPN2O95208 641 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 C6orf222P0C671 652 aaPredicted RBP13.42□□□□□ -0.26
TMEM260-201ENST00000261556 UCHL3P15374 230 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 MAPK4P31152 587 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 ACADVLP49748 655 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 RCAN1P53805 252 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 UBAP2LQ14157 1087 aaKnown RBP13.42□□□□□ -0.26
TMEM260-201ENST00000261556 SF3B4Q15427 424 aaKnown RBP eCLIP13.42□□□□□ -0.262e-6■■■■■ 30.8
TMEM260-201ENST00000261556 SLC1A5Q15758 541 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 DEPDC1Q5TB30 811 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 PADI6Q6TGC4 694 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 MTMR4Q9NYA4 1195 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 IPPQ9Y573 584 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 RFX7Q2KHR2 1363 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 A0A1W2PQ72 361 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 RAD51BO15315 384 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 CHRNB1P11230 501 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms