RNA–Protein interactions for RNA: ENST00000259239.7

IMP4-201, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IMP4, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-201ENST00000259239 ALG13Q9NP73 1137 aaKnown RBP18.63■□□□□ 0.57
IMP4-201ENST00000259239 NGRNQ9NPE2 291 aaKnown RBP18.63■□□□□ 0.57
IMP4-201ENST00000259239 MTUS1Q9ULD2 1270 aa18.63■□□□□ 0.57
IMP4-201ENST00000259239 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.63■□□□□ 0.57
IMP4-201ENST00000259239 ABLIM3O94929 683 aa18.63■□□□□ 0.57
IMP4-201ENST00000259239 CSPG5O95196 566 aa18.63■□□□□ 0.57
IMP4-201ENST00000259239 LTFP02788 710 aa18.63■□□□□ 0.57
IMP4-201ENST00000259239 MATKP42679 507 aa18.63■□□□□ 0.57
IMP4-201ENST00000259239 PTPN9P43378 593 aa18.63■□□□□ 0.57
IMP4-201ENST00000259239 SLC25A11Q02978 314 aaKnown RBP18.63■□□□□ 0.57
IMP4-201ENST00000259239 CKAP4Q07065 602 aaKnown RBP18.63■□□□□ 0.57
IMP4-201ENST00000259239 DCAF6Q58WW2 860 aa18.63■□□□□ 0.57
IMP4-201ENST00000259239 NUP93Q8N1F7 819 aa18.63■□□□□ 0.57
IMP4-201ENST00000259239 SCML4Q8N228 414 aa18.63■□□□□ 0.57
IMP4-201ENST00000259239 CEP112Q8N8E3 955 aa18.63■□□□□ 0.57
IMP4-201ENST00000259239 ZNF461Q8TAF7 563 aa18.63■□□□□ 0.57
IMP4-201ENST00000259239 IRGQQ8WZA9 623 aa18.63■□□□□ 0.57
IMP4-201ENST00000259239 SLC2A13Q96QE2 648 aa18.63■□□□□ 0.57
IMP4-201ENST00000259239 KLHL11Q9NVR0 708 aa18.63■□□□□ 0.57
IMP4-201ENST00000259239 AFF4Q9UHB7 1163 aaKnown RBP18.63■□□□□ 0.57
IMP4-201ENST00000259239 MYO7AQ13402 2215 aa18.62■□□□□ 0.57
IMP4-201ENST00000259239 LILRB3O75022 631 aa18.62■□□□□ 0.57
IMP4-201ENST00000259239 FYNP06241 537 aa18.62■□□□□ 0.57
IMP4-201ENST00000259239 CA3P07451 260 aa18.62■□□□□ 0.57
IMP4-201ENST00000259239 PYGMP11217 842 aa18.62■□□□□ 0.57
IMP4-201ENST00000259239 IL1R2P27930 398 aa18.62■□□□□ 0.57
IMP4-201ENST00000259239 MIPP30301 263 aa18.62■□□□□ 0.57
IMP4-201ENST00000259239 USP46P62068 366 aa18.62■□□□□ 0.57
IMP4-201ENST00000259239 ATP13A4Q4VNC1 1196 aa18.62■□□□□ 0.57
IMP4-201ENST00000259239 SYPL2Q5VXT5 272 aa18.62■□□□□ 0.57
IMP4-201ENST00000259239 TBCBQ99426 244 aa18.62■□□□□ 0.57
IMP4-201ENST00000259239 C11orf84Q9BUA3 381 aaPredicted RBP18.62■□□□□ 0.57
IMP4-201ENST00000259239 ZWILCHQ9H900 591 aa18.62■□□□□ 0.57
IMP4-201ENST00000259239 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.62■□□□□ 0.57
IMP4-201ENST00000259239 PCSK1NQ9UHG2 260 aa18.62■□□□□ 0.57
IMP4-201ENST00000259239 NAALADL1Q9UQQ1 740 aa18.62■□□□□ 0.57
IMP4-201ENST00000259239 RWDD3Q9Y3V2 267 aa18.62■□□□□ 0.57
IMP4-201ENST00000259239 TNRC18O15417 2968 aaPredicted RBP18.61■□□□□ 0.57
IMP4-201ENST00000259239 TEX28O15482 410 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 SEC24AO95486 1093 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 DESP17661 470 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 ATF6P18850 670 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 PCK1P35558 622 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 PAFAH1B1P43034 410 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 SULT1E1P49888 294 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 PITX1P78337 314 aaPredicted RBP18.61■□□□□ 0.57
IMP4-201ENST00000259239 RAB33AQ14088 237 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 SMTNL2Q2TAL5 461 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 SEL1L2Q5TEA6 688 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 LRRC38Q5VT99 294 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 TPGS2Q68CL5 300 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 DENND5BQ6ZUT9 1274 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 TMC7Q7Z402 723 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 GPR65Q8IYL9 337 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 KATNAL2Q8IYT4 538 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 RASGEF1CQ8N431 466 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 MYRIPQ8NFW9 859 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 ACSF2Q96CM8 615 aaPredicted RBP18.61■□□□□ 0.57
IMP4-201ENST00000259239 PEBP4Q96S96 227 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 PLVAPQ9BX97 442 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 FNIP2Q9P278 1114 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 USP18Q9UMW8 372 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 ATG2AQ2TAZ0 1938 aa18.61■□□□□ 0.57
IMP4-201ENST00000259239 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.6■□□□□ 0.57
IMP4-201ENST00000259239 CTAGE15A4D2H0 777 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 PGRMC1O00264 195 aaKnown RBP18.6■□□□□ 0.57
IMP4-201ENST00000259239 CAPN9O14815 690 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 CTAGE8P0CG41 777 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 ATF2P15336 505 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 NOS2P35228 1153 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 HDAC4P56524 1084 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 RPL10AP62906 217 aaKnown RBP18.6■□□□□ 0.57
IMP4-201ENST00000259239 CREMQ03060 361 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 HADHQ16836 314 aaKnown RBP18.6■□□□□ 0.57
IMP4-201ENST00000259239 ZFYVE27Q5T4F4 411 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 OTUD1Q5VV17 481 aaPredicted RBP18.6■□□□□ 0.57
IMP4-201ENST00000259239 CTAGE6Q86UF2 777 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 CTAGE4Q8IX94 777 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 ACTRT1Q8TDG2 376 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 GIPC2Q8TF65 315 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 EDEM1Q92611 657 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 GOLGA1Q92805 767 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 SPATA17Q96L03 361 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 UBE2OQ9C0C9 1292 aaKnown RBP18.6■□□□□ 0.57
IMP4-201ENST00000259239 RXFP1Q9HBX9 757 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 CALCOCO1Q9P1Z2 691 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 RNF14Q9UBS8 474 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 LZTS1Q9Y250 596 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 MTCL1Q9Y4B5 1905 aaKnown RBP18.6■□□□□ 0.57
IMP4-201ENST00000259239 LAMA3Q16787 3333 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 TRUB2O95900 331 aaKnown RBP18.6■□□□□ 0.57
IMP4-201ENST00000259239 FGGP02679 453 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 KRT1P04264 644 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 CNPP09543 421 aaKnown RBP18.6■□□□□ 0.57
IMP4-201ENST00000259239 NCAM1P13591 858 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 DNAJB1P25685 340 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 PGFP49763 221 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 ATXN1P54253 815 aaKnown RBP18.6■□□□□ 0.57
IMP4-201ENST00000259239 ERVFC1P60507 584 aa18.6■□□□□ 0.57
IMP4-201ENST00000259239 YWHAGP61981 247 aaKnown RBP eCLIP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms