RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 ZNF180Q9UJW8 692 aa17.65■□□□□ 0.42
CDK4-201ENST00000257904 USP18Q9UMW8 372 aa17.65■□□□□ 0.42
CDK4-201ENST00000257904 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.65■□□□□ 0.42
CDK4-201ENST00000257904 MED7O43513 233 aa17.65■□□□□ 0.42
CDK4-201ENST00000257904 TOM1L1O75674 476 aa17.65■□□□□ 0.42
CDK4-201ENST00000257904 KRT37O76014 449 aa17.65■□□□□ 0.42
CDK4-201ENST00000257904 TRUB2O95900 331 aaKnown RBP17.65■□□□□ 0.42
CDK4-201ENST00000257904 ERBB2P04626 1255 aa17.65■□□□□ 0.42
CDK4-201ENST00000257904 ENO1P06733 434 aaKnown RBP17.65■□□□□ 0.42
CDK4-201ENST00000257904 SNRPAP09012 282 aaKnown RBP17.65■□□□□ 0.42
CDK4-201ENST00000257904 PTPRAP18433 802 aa17.65■□□□□ 0.42
CDK4-201ENST00000257904 YWHAZP63104 245 aaKnown RBP17.65■□□□□ 0.42
CDK4-201ENST00000257904 NET1Q7Z628 596 aaPredicted RBP17.65■□□□□ 0.42
CDK4-201ENST00000257904 PPM1NQ8N819 430 aa17.65■□□□□ 0.42
CDK4-201ENST00000257904 RBM15BQ8NDT2 890 aaKnown RBP17.65■□□□□ 0.42
CDK4-201ENST00000257904 SMC1BQ8NDV3 1235 aa17.65■□□□□ 0.42
CDK4-201ENST00000257904 FBXO27Q8NI29 283 aa17.65■□□□□ 0.42
CDK4-201ENST00000257904 GATA6Q92908 595 aa17.65■□□□□ 0.42
CDK4-201ENST00000257904 FAF2Q96CS3 445 aa17.65■□□□□ 0.42
CDK4-201ENST00000257904 AS3MTQ9HBK9 375 aa17.65■□□□□ 0.42
CDK4-201ENST00000257904 PPARGC1AQ9UBK2 798 aaKnown RBP17.65■□□□□ 0.42
CDK4-201ENST00000257904 ANGPTL2Q9UKU9 493 aa17.65■□□□□ 0.42
CDK4-201ENST00000257904 C2CD2Q9Y426 696 aa17.65■□□□□ 0.42
CDK4-201ENST00000257904 MAGEA13PA6NCF6 341 aa17.64■□□□□ 0.41
CDK4-201ENST00000257904 MSCO60682 206 aa17.64■□□□□ 0.41
CDK4-201ENST00000257904 HIRAP54198 1017 aaPredicted RBP17.64■□□□□ 0.41
CDK4-201ENST00000257904 MRPS5P82675 430 aaKnown RBP17.64■□□□□ 0.41
CDK4-201ENST00000257904 TMPRSS15P98073 1019 aa17.64■□□□□ 0.41
CDK4-201ENST00000257904 TFAMQ00059 246 aaKnown RBP17.64■□□□□ 0.41
CDK4-201ENST00000257904 ATG16L1Q676U5 607 aa17.64■□□□□ 0.41
CDK4-201ENST00000257904 ARID3BQ8IVW6 561 aaPredicted RBP17.64■□□□□ 0.41
CDK4-201ENST00000257904 CTAGE3PQ8IX95 158 aa17.64■□□□□ 0.41
CDK4-201ENST00000257904 ZNF280CQ8ND82 737 aa17.64■□□□□ 0.41
CDK4-201ENST00000257904 E2F7Q96AV8 911 aa17.64■□□□□ 0.41
CDK4-201ENST00000257904 MRPL4Q9BYD3 311 aaKnown RBP17.64■□□□□ 0.41
CDK4-201ENST00000257904 WWP1Q9H0M0 922 aa17.64■□□□□ 0.41
CDK4-201ENST00000257904 PIDD1Q9HB75 910 aa17.64■□□□□ 0.41
CDK4-201ENST00000257904 ZNF214Q9UL59 606 aaPredicted RBP17.64■□□□□ 0.41
CDK4-201ENST00000257904 PLA2G4CQ9UP65 541 aa17.64■□□□□ 0.41
CDK4-201ENST00000257904 OGTO15294 1046 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 RNF8O76064 485 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 CCNFP41002 786 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 MMRN1Q13201 1228 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 ACAP1Q15027 740 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 TEX44Q53QW1 395 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 CES4AQ5XG92 561 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 SMYD5Q6GMV2 418 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 RFX8Q6ZV50 586 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 SCUBE1Q8IWY4 988 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 PHC3Q8NDX5 983 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 ACAP3Q96P50 834 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 RAB6BQ9NRW1 208 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 GGA3Q9NZ52 723 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 SIRPGQ9P1W8 387 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 CPSF3Q9UKF6 684 aaKnown RBP17.63■□□□□ 0.41
CDK4-201ENST00000257904 COL11A1P12107 1806 aaPredicted RBP17.63■□□□□ 0.41
CDK4-201ENST00000257904 CXorf49A8MYA2 514 aaPredicted RBP17.63■□□□□ 0.41
CDK4-201ENST00000257904 RFPL1O75677 317 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 TM7SF2O76062 418 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 ENDOD1O94919 500 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 HOXC6P09630 235 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 RAP1GAPP47736 663 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 CACNA2D1P54289 1103 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 OAZ1P54368 228 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 SARNPP82979 210 aaKnown RBP17.63■□□□□ 0.41
CDK4-201ENST00000257904 ROR2Q01974 943 aaKnown RBP17.63■□□□□ 0.41
CDK4-201ENST00000257904 CDK18Q07002 472 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 SURF1Q15526 300 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 TARBP2Q15633 366 aaKnown RBP17.63■□□□□ 0.41
CDK4-201ENST00000257904 TRMT5Q32P41 509 aaKnown RBP17.63■□□□□ 0.41
CDK4-201ENST00000257904 CWF19L1Q69YN2 538 aaKnown RBP17.63■□□□□ 0.41
CDK4-201ENST00000257904 MFN1Q8IWA4 741 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 TRAPPC9Q96Q05 1148 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 PEBP4Q96S96 227 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 FRMD8Q9BZ67 464 aaPredicted RBP17.63■□□□□ 0.41
CDK4-201ENST00000257904 POPDC2Q9HBU9 364 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 MKS1Q9NXB0 559 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 NXF1Q9UBU9 619 aaKnown RBP17.63■□□□□ 0.41
CDK4-201ENST00000257904 TAGLN3Q9UI15 199 aa17.63■□□□□ 0.41
CDK4-201ENST00000257904 PRKCHP24723 683 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 HMGCS2P54868 508 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 CDH6P55285 790 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 CHI3L2Q15782 390 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 GSTA3Q16772 222 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 MDH1BQ5I0G3 518 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 FOXB2Q5VYV0 432 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 RIPOR1Q6ZS17 1223 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 GALNT15Q8N3T1 639 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 SLC4A11Q8NBS3 891 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 APBB2Q92870 758 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 PANX3Q96QZ0 392 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 PPP1R12CQ9BZL4 782 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 PLAC1Q9HBJ0 212 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 DDX43Q9NXZ2 648 aaKnown RBP17.62■□□□□ 0.41
CDK4-201ENST00000257904 PAK5Q9P286 719 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 ZC3H7BQ9UGR2 993 aaKnown RBP17.62■□□□□ 0.41
CDK4-201ENST00000257904 IGKV6D-21A0A0A0MT36 114 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 CCDC195A0A1B0GUA6 201 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 SPECC1L-ADORA2AF8WAN1 911 aa17.62■□□□□ 0.41
CDK4-201ENST00000257904 H7C0C1 242 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms