RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 GRPEL2Q8TAA5 225 aa10.57□□□□□ -0.72
TRPM1-201ENST00000256552 ZNF398Q8TD17 642 aa10.57□□□□□ -0.72
TRPM1-201ENST00000256552 PGBD4Q96DM1 585 aa10.57□□□□□ -0.72
TRPM1-201ENST00000256552 REXO4Q9GZR2 422 aaKnown RBP10.57□□□□□ -0.72
TRPM1-201ENST00000256552 PAK5Q9P286 719 aa10.57□□□□□ -0.72
TRPM1-201ENST00000256552 ADAM30Q9UKF2 790 aa10.57□□□□□ -0.72
TRPM1-201ENST00000256552 AP4B1Q9Y6B7 739 aa10.57□□□□□ -0.72
TRPM1-201ENST00000256552 HEG1Q9ULI3 1381 aa10.57□□□□□ -0.72
TRPM1-201ENST00000256552 DENND3A2RUS2 1198 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 C2CD2LO14523 706 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 PSTPIP1O43586 416 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 FXR2P51116 673 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 CCNG1P51959 295 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 BMPR2Q13873 1038 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 CCNG2Q16589 344 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 ACAD10Q6JQN1 1059 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 KBTBD2Q8IY47 623 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 OR8H2Q8N162 312 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 TADA1Q96BN2 335 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 CCDC17Q96LX7 622 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 CDRT15Q96T59 188 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 POP1Q99575 1024 aaKnown RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 RPRD1BQ9NQG5 326 aaKnown RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 LRRC4BQ9NT99 713 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 GSTT2P0CG29 244 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 GSTT2BP0CG30 244 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 COL9A3Q14050 684 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 TRIP4Q15650 581 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 TSC22D1Q15714 1073 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 ABCB5Q2M3G0 1257 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 SMTNL2Q2TAL5 461 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 BNIPLQ7Z465 357 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 BBS7Q8IWZ6 715 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 SDR16C5Q8N3Y7 309 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 SLC20A1Q8WUM9 679 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 SLC7A3Q8WY07 619 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 WRNIP1Q96S55 665 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 OXCT2Q9BYC2 517 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 RNF38Q9H0F5 515 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 PIGUQ9H490 435 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 RGS5O15539 181 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 OXSR1O95747 527 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 FYNP06241 537 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 FGFR3P22607 806 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 ARHGEF6Q15052 776 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 FBXL16Q8N461 479 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 VMP1Q96GC9 406 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 DHX35Q9H5Z1 703 aaKnown RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 RUBCNLQ9H714 662 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 KIAA1586Q9HCI6 787 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 WDR70Q9NW82 654 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 SERPINB13Q9UIV8 391 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 ABCA6Q8N139 1617 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 GSSP48637 474 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 PIGHQ14442 188 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 MTERF2Q49AM1 385 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 TBCELQ5QJ74 424 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 FAM102AQ5T9C2 384 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 RRM2BQ7LG56 351 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 RTKN2Q8IZC4 609 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 RIN3Q8TB24 985 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 FBXO6Q9NRD1 293 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 DNAJC5BQ9UF47 199 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 GLI2P10070 1586 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 MYO1GB0I1T2 1018 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 PEX11AO75192 247 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 SDC4P31431 198 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 SPRP35270 261 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 CSE1LP55060 971 aaKnown RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 TSTA3Q13630 321 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 USP10Q14694 798 aaKnown RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 ZNF846Q147U1 533 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 AAGABQ6PD74 315 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 PRR23CQ6ZRP0 262 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 BHLHE22Q8NFJ8 381 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 SRPK1Q96SB4 655 aaKnown RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 TMEM121Q9BTD3 319 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.56□□□□□ -0.72
TRPM1-201ENST00000256552 N6AMT1Q9Y5N5 214 aa10.56□□□□□ -0.72
TRPM1-201ENST00000256552 CENPXA8MT69 81 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 EDF1O60869 148 aaKnown RBP10.55□□□□□ -0.72
TRPM1-201ENST00000256552 SSTR1P30872 391 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 SLC1A6P48664 564 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 CASP4P49662 377 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 MIIPQ5JXC2 388 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 SLFN12LQ6IEE8 588 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 SLC2A7Q6PXP3 512 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 SH3BP5LQ7L8J4 393 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 OTOAQ7RTW8 1153 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 ERI1Q8IV48 349 aaKnown RBP10.55□□□□□ -0.72
TRPM1-201ENST00000256552 EHD1Q9H4M9 534 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 TRPC5OSA6NMA1 111 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 M0QYV0 167 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 TRIM13O60858 407 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 PDE9AO76083 593 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 ZBTB11O95625 1053 aaPredicted RBP10.55□□□□□ -0.72
TRPM1-201ENST00000256552 PRDX5P30044 214 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 CHKAP35790 457 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 PRKG1Q13976 671 aa10.55□□□□□ -0.72
TRPM1-201ENST00000256552 DGUOKQ16854 277 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms