RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 RNF149Q8NC42 400 aa11.77□□□□□ -0.52
PDE6B-201ENST00000255622 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.77□□□□□ -0.52
PDE6B-201ENST00000255622 KLF15Q9UIH9 416 aa11.77□□□□□ -0.52
PDE6B-201ENST00000255622 IGKV6D-21A0A0A0MT36 114 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 ATP2A1O14983 1001 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 B4GALT5O43286 388 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 MGEA5O60502 916 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 STAM2O75886 525 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 CALB1P05937 261 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 KRT16P08779 473 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 ASPAP45381 313 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 TMED10P49755 219 aaKnown RBP11.77□□□□□ -0.53
PDE6B-201ENST00000255622 CCR3P51677 355 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 VCPP55072 806 aaKnown RBP11.77□□□□□ -0.53
PDE6B-201ENST00000255622 ADARP55265 1226 aaKnown RBP11.77□□□□□ -0.53
PDE6B-201ENST00000255622 CDH8P55286 799 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 PTPN20Q4JDL3 420 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 MSS51Q4VC12 460 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 SYCP2LQ5T4T6 812 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 ANKRD13BQ86YJ7 626 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 WDR49Q8IV35 697 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 CFAP57Q96MR6 1250 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 PITPNM3Q9BZ71 974 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 NIF3L1Q9GZT8 377 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 TUT1Q9H6E5 874 aaKnown RBP11.77□□□□□ -0.53
PDE6B-201ENST00000255622 ZNF304Q9HCX3 659 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 BTBD7Q9P203 1132 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 HESX1Q9UBX0 185 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 C3orf70A6NLC5 250 aaPredicted RBP11.77□□□□□ -0.53
PDE6B-201ENST00000255622 NQO1P15559 274 aaKnown RBP11.77□□□□□ -0.53
PDE6B-201ENST00000255622 CETN2P41208 172 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 COPS2P61201 443 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 BNIP1Q12981 228 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 MTFR1Q15390 333 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 TAF5Q15542 800 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 TMEM35BQ8NCS4 154 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 KLRG1Q96E93 195 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 C12orf65Q9H3J6 166 aaKnown RBP11.77□□□□□ -0.53
PDE6B-201ENST00000255622 TRABDQ9H4I3 376 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 TMEM134Q9H6X4 195 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 AGTPBP1Q9UPW5 1226 aa11.77□□□□□ -0.53
PDE6B-201ENST00000255622 MGAMO43451 1857 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 A0A0J9YVX5 310 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 CSDE1O75534 798 aaKnown RBP11.76□□□□□ -0.53
PDE6B-201ENST00000255622 TOM1L1O75674 476 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 CD19P15391 556 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 RPS12P25398 132 aaKnown RBP11.76□□□□□ -0.53
PDE6B-201ENST00000255622 LAMTOR4Q0VGL1 99 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 TRPC3Q13507 836 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 ZNF699Q32M78 642 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 UCMAQ8WVF2 138 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 ACO2Q99798 780 aaKnown RBP11.76□□□□□ -0.53
PDE6B-201ENST00000255622 DNAI2Q9GZS0 605 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 HOXC10Q9NYD6 342 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 HMGXB4Q9UGU5 601 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 DSEQ9UL01 958 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 SSC5DA1L4H1 1573 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 TCRBV7S3A2A0A539 114 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 SOWAHBA6NEL2 793 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 C19orf81C9J6K1 198 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 ARIH2O95376 493 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 ASMTLO95671 621 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 OXSR1O95747 527 aaPredicted RBP11.76□□□□□ -0.53
PDE6B-201ENST00000255622 KRT19P08727 400 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 ABHD2P08910 425 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 FGFR1P11362 822 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 PSMA2P25787 234 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 SSTR1P30872 391 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 ICAM3P32942 547 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 GPX6P59796 221 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 OTUD4Q01804 1114 aaKnown RBP11.76□□□□□ -0.53
PDE6B-201ENST00000255622 LMNB2Q03252 620 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 SLC1A5Q15758 541 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 CRY1Q16526 586 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 PCSK7Q16549 785 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 KCTD21Q4G0X4 260 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 FNBP1LQ5T0N5 605 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 FOXB2Q5VYV0 432 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 RAVER1Q8IY67 606 aaKnown RBP11.76□□□□□ -0.53
PDE6B-201ENST00000255622 ACTL9Q8TC94 416 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 KLHL29Q96CT2 875 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 WDR83Q9BRX9 315 aaKnown RBP11.76□□□□□ -0.53
PDE6B-201ENST00000255622 MRPL4Q9BYD3 311 aaKnown RBP11.76□□□□□ -0.53
PDE6B-201ENST00000255622 XYLT2Q9H1B5 865 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 RSPH9Q9H1X1 276 aaPredicted RBP11.76□□□□□ -0.53
PDE6B-201ENST00000255622 GGA3Q9NZ52 723 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 PCSK1NQ9UHG2 260 aa11.76□□□□□ -0.53
PDE6B-201ENST00000255622 PIK3R2O00459 728 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 LRCH4O75427 683 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 MAFO75444 373 aaPredicted RBP11.75□□□□□ -0.53
PDE6B-201ENST00000255622 PRKCBP05771 671 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 HOXC6P09630 235 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 ATP11AP98196 1134 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 EIF2B5Q13144 721 aaKnown RBP11.75□□□□□ -0.53
PDE6B-201ENST00000255622 TFDP1Q14186 410 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 DUOXA2Q1HG44 320 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 HSDL1Q3SXM5 330 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 PPP1R21Q6ZMI0 780 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 RHPN2Q8IUC4 686 aa11.75□□□□□ -0.53
PDE6B-201ENST00000255622 FBF1Q8TES7 1133 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms