RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 ERMARDQ5T6L9 678 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 HIST2H2AA3Q6FI13 130 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 KIAA1324Q6UXG2 1013 aaKnown RBP9.54□□□□□ -0.88
PDE6A-201ENST00000255266 ECHDC2Q86YB7 292 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 TRIM59Q8IWR1 403 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 PPCSQ9HAB8 311 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.54□□□□□ -0.88
PDE6A-201ENST00000255266 AFF4Q9UHB7 1163 aaKnown RBP9.54□□□□□ -0.88
PDE6A-201ENST00000255266 TMEM150BA6NC51 233 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 ANKRD63C9JTQ0 380 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 RPN2P04844 631 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 SNRPD1P62314 119 aaKnown RBP9.54□□□□□ -0.88
PDE6A-201ENST00000255266 PFKPQ01813 784 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 ZRANB3Q5FWF4 1079 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 C12orf56Q8IXR9 622 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 RUBCNQ92622 972 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 VCXQ9H320 206 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 EML4Q9HC35 981 aaKnown RBP9.54□□□□□ -0.88
PDE6A-201ENST00000255266 SMPD4Q9NXE4 827 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 CLDND1Q9NY35 253 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 SUN2Q9UH99 717 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 DRG1Q9Y295 367 aaKnown RBP9.54□□□□□ -0.88
PDE6A-201ENST00000255266 ATP9BO43861 1147 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 NFICP08651 508 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 PTPN3P26045 913 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 TAF11Q15544 211 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 UGCGQ16739 394 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 EXT2Q93063 718 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 BHMTQ93088 406 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 NLNQ9BYT8 704 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 SEMA6BQ9H3T3 888 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 COL18A1P39060 1754 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 CCL16O15467 120 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 OR1E1P30953 314 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 STIP1P31948 543 aaKnown RBP9.54□□□□□ -0.88
PDE6A-201ENST00000255266 ARSEP51690 589 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 FMR1Q06787 632 aaKnown RBP eCLIP9.54□□□□□ -0.88
PDE6A-201ENST00000255266 GRSF1Q12849 480 aaKnown RBP eCLIP9.54□□□□□ -0.88
PDE6A-201ENST00000255266 NR1I3Q14994 352 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 FIGNQ5HY92 759 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 CCNJLQ8IV13 435 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 ZBTB45Q96K62 511 aaPredicted RBP9.54□□□□□ -0.88
PDE6A-201ENST00000255266 FAM129AQ9BZQ8 928 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 PCDHB9Q9Y5E1 797 aa9.54□□□□□ -0.88
PDE6A-201ENST00000255266 NRAPQ86VF7 1730 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 KIF3CO14782 793 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 SPTLC1O15269 473 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 TEX33O43247 280 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 NOS2P35228 1153 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 CLCN1P35523 988 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 SERPINB9P50453 376 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 PCSK7Q16549 785 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 SHROOM1Q2M3G4 852 aaPredicted RBP9.53□□□□□ -0.88
PDE6A-201ENST00000255266 INAVAQ3KP66 663 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 GDF6Q6KF10 455 aaPredicted RBP9.53□□□□□ -0.88
PDE6A-201ENST00000255266 LRRC49Q8IUZ0 686 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 IPMKQ8NFU5 416 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 LENG1Q96BZ8 264 aaPredicted RBP9.53□□□□□ -0.88
PDE6A-201ENST00000255266 APOL5Q9BWW9 433 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 POLMQ9NP87 494 aaPredicted RBP9.53□□□□□ -0.88
PDE6A-201ENST00000255266 TLR9Q9NR96 1032 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 HEATR9A2RTY3 570 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 B4GALT4O60513 344 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 TSPAN3O60637 253 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 ATG13O75143 517 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 MTA2O94776 668 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 SYF2O95926 243 aaKnown RBP9.53□□□□□ -0.88
PDE6A-201ENST00000255266 SERPINA4P29622 427 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 CASP4P49662 377 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 ZNF131P52739 623 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 GRIN1Q05586 938 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 C2orf54Q08AI8 447 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 ORC1Q13415 861 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 CNGA2Q16280 664 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 RBBP7Q16576 425 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 MPPE1Q53F39 396 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 PPP1R15BQ5SWA1 713 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 SCLYQ96I15 445 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 DHX33Q9H6R0 707 aaKnown RBP9.53□□□□□ -0.88
PDE6A-201ENST00000255266 C22orf31O95567 290 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 CCNE2O96020 404 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 DNTTP04053 509 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 CCDC130P13994 396 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 CES1P23141 567 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 CDH8P55286 799 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 MBTD1Q05BQ5 628 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 MRNIPQ6NTE8 343 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 FOXR2Q6PJQ5 311 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 OR8D1Q8WZ84 308 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 TRIB2Q92519 343 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 EMID1Q96A84 441 aaPredicted RBP9.53□□□□□ -0.88
PDE6A-201ENST00000255266 AHCYL2Q96HN2 611 aaKnown RBP9.53□□□□□ -0.88
PDE6A-201ENST00000255266 FAXDC2Q96IV6 333 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 MCOLN1Q9GZU1 580 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 PDZD7Q9H5P4 517 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 ZFP14Q9HCL3 533 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 BLOC1S4Q9NUP1 217 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 UBA2Q9UBT2 640 aaPredicted RBP9.53□□□□□ -0.88
PDE6A-201ENST00000255266 SLC39A10Q9ULF5 831 aa9.53□□□□□ -0.88
PDE6A-201ENST00000255266 FAM47DPA6NHR8 397 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms