RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 DIP2AQ14689 1571 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 ENO4A6NNW6 628 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 E9PBE3 544 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 FAM86B1E9PN63 330 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 KLHL41O60662 606 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 ZNF189O75820 626 aaPredicted RBP19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 FAM86B2P0C5J1 330 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 MLNP12872 115 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 STIP1P31948 543 aaKnown RBP19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 PLEKHM3Q6ZWE6 761 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 RD3Q7Z3Z2 195 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 VPS33BQ9H267 617 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 CAAP1Q9H8G2 361 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 ARHGAP20Q9P2F6 1191 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 SDR42E2A6NKP2 422 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 SMNDC1O75940 238 aaKnown RBP eCLIP19.29■□□□□ 0.685e-12■■■■□ 23.6
SMARCC1-201ENST00000254480 GRIK4Q16099 956 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 NFIL3Q16649 462 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 C10orf88Q9H8K7 445 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 KBTBD4Q9NVX7 518 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 NDST1P52848 882 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 ADIGQ0VDE8 80 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 B3GALNT2Q8NCR0 500 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 TISP43B9A030 160 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 VPS26AO75436 327 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 SERPINI2O75830 405 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 SHMT1P34896 483 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 RANBP1P43487 201 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 COPAP53621 1224 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 PTPN11Q06124 597 aaPredicted RBP19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 TCEA2Q15560 299 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 OOSP2Q86WS3 158 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 FBXO25Q8TCJ0 367 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 SLC2A3P11169 496 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 CCDC60Q8IWA6 550 aaPredicted RBP19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 PHACTR4Q8IZ21 702 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 ZFP42Q96MM3 310 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 CDC42EP4Q9H3Q1 356 aaKnown RBP19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 DDX4Q9NQI0 724 aaKnown RBP19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 GOLGA8TH3BQL2 631 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 H7C4K7 107 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 GAS2O43903 313 aaKnown RBP19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 CYP2F1P24903 491 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 GPC1P35052 558 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 FNTAP49354 379 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 Q4G0T1 1027 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 COLGALT1Q8NBJ5 622 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 KIAA0895Q8NCT3 520 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 MROH8Q9H579 483 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 TRPM5Q9NZQ8 1165 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 KRT87PA6NCN2 255 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 CDH2P19022 906 aaPredicted RBP19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 MUTP22033 750 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 CHI3L1P36222 383 aaPredicted RBP19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 PCYT1AP49585 367 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 RPL10AP62906 217 aaKnown RBP19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 SCUBE3Q8IX30 993 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 PAFAH2Q99487 392 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 NEK2P51955 445 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 CHMP1BQ7LBR1 199 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 DNAJC16Q9Y2G8 782 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 CAMSAP1Q5T5Y3 1602 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 CEMIPQ8WUJ3 1361 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 EFCAB14O75071 495 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 BGNP21810 368 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 SKOR1P84550 965 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 KCNMA1Q12791 1236 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 STARD3Q14849 445 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 PHF21BQ96EK2 531 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 PABPC3Q9H361 631 aaKnown RBP19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 TSPAN16Q9UKR8 245 aa19.28■□□□□ 0.68
SMARCC1-201ENST00000254480 LRRIQ3A6PVS8 624 aaPredicted RBP19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 FBXO47Q5MNV8 452 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 OLFML2BQ68BL8 750 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 VPS37AQ8NEZ2 397 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 AAR2Q9Y312 384 aaKnown RBP19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 O00370 1275 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 NR5A2O00482 541 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 SH3BGRLO75368 114 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 KATNA1O75449 491 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 FGFR1P11362 822 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 GMCL1Q96IK5 515 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 CCT7Q99832 543 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 FAM129AQ9BZQ8 928 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 KDM1AO60341 852 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 PLA2G6O60733 806 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 KCTD19Q17RG1 926 aaPredicted RBP19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 CENPPQ6IPU0 288 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 LPCAT1Q8NF37 534 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 DNAJC9Q8WXX5 260 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 SERPINB12Q96P63 405 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 ZSCAN5CA6NGD5 496 aaPredicted RBP19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 NPM3O75607 178 aaKnown RBP19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 ALDH1A2O94788 518 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 FGFR2P21802 821 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 BEX3Q00994 111 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 P3H2Q8IVL5 708 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 GMCL1P1Q8NEA9 526 aa19.27■□□□□ 0.68
SMARCC1-201ENST00000254480 HNRNPCP07910 306 aaKnown RBP eCLIP19.27■□□□□ 0.673e-6■■□□□ 11.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms