RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 NMUR1Q9HB89 426 aa26.42■■□□□ 1.82
LSM7-201ENST00000252622 SIX2Q9NPC8 291 aa26.42■■□□□ 1.82
LSM7-201ENST00000252622 DUS2Q9NX74 493 aaKnown RBP26.42■■□□□ 1.82
LSM7-201ENST00000252622 SMPD4Q9NXE4 827 aa26.42■■□□□ 1.82
LSM7-201ENST00000252622 TULP2O00295 520 aa26.41■■□□□ 1.82
LSM7-201ENST00000252622 NCAM2O15394 837 aa26.41■■□□□ 1.82
LSM7-201ENST00000252622 BRD2P25440 801 aaKnown RBP26.41■■□□□ 1.82
LSM7-201ENST00000252622 SOX9P48436 509 aa26.41■■□□□ 1.82
LSM7-201ENST00000252622 APBA1Q02410 837 aa26.41■■□□□ 1.82
LSM7-201ENST00000252622 ZNF276Q8N554 614 aa26.41■■□□□ 1.82
LSM7-201ENST00000252622 TTC16Q8NEE8 873 aa26.41■■□□□ 1.82
LSM7-201ENST00000252622 ATP2A3Q93084 1043 aa26.41■■□□□ 1.82
LSM7-201ENST00000252622 CLDN23Q96B33 292 aa26.41■■□□□ 1.82
LSM7-201ENST00000252622 FANCLQ9NW38 375 aa26.41■■□□□ 1.82
LSM7-201ENST00000252622 OSER1Q9NX31 292 aa26.41■■□□□ 1.82
LSM7-201ENST00000252622 CLIC5Q9NZA1 410 aa26.41■■□□□ 1.82
LSM7-201ENST00000252622 WNT6Q9Y6F9 365 aa26.41■■□□□ 1.82
LSM7-201ENST00000252622 MIA3Q5JRA6 1907 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 A0A1W2PQH9 124 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 ARSAP15289 507 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 TKTL1P51854 596 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 PTPN5P54829 565 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 KLHL40Q2TBA0 621 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 EML3Q32P44 896 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 KLHDC10Q6PID8 442 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 SCD5Q86SK9 330 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 ARHGAP18Q8N392 663 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 CPA6Q8N4T0 437 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 TTC8Q8TAM2 541 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 UBA3Q8TBC4 463 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 KCTD13Q8WZ19 329 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 SHC3Q92529 594 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 NACA2Q9H009 215 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.4■■□□□ 1.82
LSM7-201ENST00000252622 TAB2Q9NYJ8 693 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 CFAP97Q9P2B7 532 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 NAGPAQ9UK23 515 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 F5P12259 2224 aa26.4■■□□□ 1.82
LSM7-201ENST00000252622 M0QYV0 167 aa26.39■■□□□ 1.82
LSM7-201ENST00000252622 PTMSP20962 102 aa26.39■■□□□ 1.82
LSM7-201ENST00000252622 RPS9P46781 194 aaKnown RBP26.39■■□□□ 1.82
LSM7-201ENST00000252622 TCF15Q12870 199 aa26.39■■□□□ 1.82
LSM7-201ENST00000252622 MEA1Q16626 185 aa26.39■■□□□ 1.82
LSM7-201ENST00000252622 PM20D1Q6GTS8 502 aa26.39■■□□□ 1.82
LSM7-201ENST00000252622 TADA2BQ86TJ2 420 aa26.39■■□□□ 1.82
LSM7-201ENST00000252622 LRRC4Q9HBW1 653 aa26.39■■□□□ 1.82
LSM7-201ENST00000252622 NDRG2Q9UN36 371 aaKnown RBP26.39■■□□□ 1.82
LSM7-201ENST00000252622 OTOL1A6NHN0 477 aaPredicted RBP26.38■■□□□ 1.81
LSM7-201ENST00000252622 BECN2A8MW95 431 aa26.38■■□□□ 1.81
LSM7-201ENST00000252622 PES1O00541 588 aaKnown RBP26.38■■□□□ 1.81
LSM7-201ENST00000252622 SLC9A3R1O14745 358 aaPredicted RBP26.38■■□□□ 1.81
LSM7-201ENST00000252622 ZBED1O96006 694 aa26.38■■□□□ 1.81
LSM7-201ENST00000252622 CALCAP01258 141 aa26.38■■□□□ 1.81
LSM7-201ENST00000252622 RARGP13631 454 aa26.38■■□□□ 1.81
LSM7-201ENST00000252622 FZD5Q13467 585 aa26.38■■□□□ 1.81
LSM7-201ENST00000252622 KRT31Q15323 416 aa26.38■■□□□ 1.81
LSM7-201ENST00000252622 ARHGAP44Q17R89 818 aa26.38■■□□□ 1.81
LSM7-201ENST00000252622 DPY19L2P1Q6NXN4 242 aa26.38■■□□□ 1.81
LSM7-201ENST00000252622 TXNDC11Q6PKC3 985 aa26.38■■□□□ 1.81
LSM7-201ENST00000252622 SLC35F5Q8WV83 523 aa26.38■■□□□ 1.81
LSM7-201ENST00000252622 SECISBP2LQ93073 1101 aaKnown RBP26.38■■□□□ 1.81
LSM7-201ENST00000252622 CDK5RAP1Q96SZ6 601 aaKnown RBP26.38■■□□□ 1.81
LSM7-201ENST00000252622 ULBP1Q9BZM6 244 aa26.38■■□□□ 1.81
LSM7-201ENST00000252622 NAT10Q9H0A0 1025 aaKnown RBP26.38■■□□□ 1.81
LSM7-201ENST00000252622 ECT2Q9H8V3 914 aa26.38■■□□□ 1.81
LSM7-201ENST00000252622 DNAJC12Q9UKB3 198 aa26.38■■□□□ 1.81
LSM7-201ENST00000252622 E2F8A0AVK6 867 aa26.37■■□□□ 1.81
LSM7-201ENST00000252622 NFATC1O95644 943 aa26.37■■□□□ 1.81
LSM7-201ENST00000252622 TPM2P07951 284 aa26.37■■□□□ 1.81
LSM7-201ENST00000252622 RALAP11233 206 aa26.37■■□□□ 1.81
LSM7-201ENST00000252622 ATP5C1P36542 298 aaKnown RBP26.37■■□□□ 1.81
LSM7-201ENST00000252622 AMPD2Q01433 879 aa26.37■■□□□ 1.81
LSM7-201ENST00000252622 ADIGQ0VDE8 80 aa26.37■■□□□ 1.81
LSM7-201ENST00000252622 KCNMA1Q12791 1236 aa26.37■■□□□ 1.81
LSM7-201ENST00000252622 NCAPHQ15003 741 aa26.37■■□□□ 1.81
LSM7-201ENST00000252622 SCML4Q8N228 414 aa26.37■■□□□ 1.81
LSM7-201ENST00000252622 IRF2BPLQ9H1B7 796 aa26.37■■□□□ 1.81
LSM7-201ENST00000252622 AJAP1Q9UKB5 411 aaPredicted RBP26.37■■□□□ 1.81
LSM7-201ENST00000252622 MED7O43513 233 aa26.36■■□□□ 1.81
LSM7-201ENST00000252622 TBX18O95935 607 aa26.36■■□□□ 1.81
LSM7-201ENST00000252622 GNA15P30679 374 aa26.36■■□□□ 1.81
LSM7-201ENST00000252622 SIX6OS1Q8N1H7 587 aa26.36■■□□□ 1.81
LSM7-201ENST00000252622 ANKRD20A12PQ8NF67 263 aa26.36■■□□□ 1.81
LSM7-201ENST00000252622 CHFRQ96EP1 664 aa26.36■■□□□ 1.81
LSM7-201ENST00000252622 HSFY1Q96LI6 401 aa26.36■■□□□ 1.81
LSM7-201ENST00000252622 BPIFA3Q9BQP9 254 aa26.36■■□□□ 1.81
LSM7-201ENST00000252622 KLF16Q9BXK1 252 aaPredicted RBP26.36■■□□□ 1.81
LSM7-201ENST00000252622 LINC00597Q9H2U6 94 aa26.36■■□□□ 1.81
LSM7-201ENST00000252622 CNGB3Q9NQW8 809 aa26.36■■□□□ 1.81
LSM7-201ENST00000252622 TBC1D14Q9P2M4 693 aa26.36■■□□□ 1.81
LSM7-201ENST00000252622 SH3BP1Q9Y3L3 701 aa26.36■■□□□ 1.81
LSM7-201ENST00000252622 ZNF18P17022 549 aa26.35■■□□□ 1.81
LSM7-201ENST00000252622 YWHAGP61981 247 aaKnown RBP eCLIP26.35■■□□□ 1.81
LSM7-201ENST00000252622 ANO6Q4KMQ2 910 aa26.35■■□□□ 1.81
LSM7-201ENST00000252622 C10orf120Q5SQS8 335 aa26.35■■□□□ 1.81
LSM7-201ENST00000252622 KLHDC7AQ5VTJ3 777 aa26.35■■□□□ 1.81
LSM7-201ENST00000252622 PMF1Q6P1K2 205 aa26.35■■□□□ 1.81
LSM7-201ENST00000252622 BHLHA9Q7RTU4 235 aa26.35■■□□□ 1.81
LSM7-201ENST00000252622 OTUB2Q96DC9 234 aa26.35■■□□□ 1.81
LSM7-201ENST00000252622 IER2Q9BTL4 223 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms