RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 IQSEC1Q6DN90 963 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 TRABD2AQ86V40 505 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 CCT6BQ92526 530 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 NSRP1Q9H0G5 558 aaKnown RBP16.43■□□□□ 0.22
LRFN1-201ENST00000248668 WDR91A4D1P6 747 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 PPP1R12AO14974 1030 aaPredicted RBP16.43■□□□□ 0.22
LRFN1-201ENST00000248668 CHUKO15111 745 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 TCEA3O75764 348 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 MFSD10Q14728 455 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 NAA25Q14CX7 972 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 KYAT1Q16773 422 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 FAM110CQ1W6H9 321 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 ZNF467Q7Z7K2 595 aaPredicted RBP16.43■□□□□ 0.22
LRFN1-201ENST00000248668 RELL1Q8IUW5 271 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 TTC25Q96NG3 672 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 DHX35Q9H5Z1 703 aaKnown RBP16.43■□□□□ 0.22
LRFN1-201ENST00000248668 RAB6BQ9NRW1 208 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 EURLQ9NYK6 297 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 CCT8L1PA6NM43 557 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 CA4P22748 312 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 RBL1P28749 1068 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 RPA3P35244 121 aaPredicted RBP16.43■□□□□ 0.22
LRFN1-201ENST00000248668 PCK1P35558 622 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 SLC6A3Q01959 620 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 DNAJC3Q13217 504 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 SLC2A14Q8TDB8 520 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 CKAP2Q8WWK9 683 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 KHSRPQ92945 711 aaKnown RBP eCLIP16.43■□□□□ 0.22
LRFN1-201ENST00000248668 FAF2Q96CS3 445 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 RNF157Q96PX1 679 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 SMIM28A0A1B0GU29 152 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 SNX3O60493 162 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 FSBPO95073 299 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 ABHD2P08910 425 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 CALRP27797 417 aaKnown RBP16.42■□□□□ 0.22
LRFN1-201ENST00000248668 BCAR1P56945 870 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 TAZQ16635 292 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 FBXO47Q5MNV8 452 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 ARMC3Q5W041 872 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 FAM149B1Q96BN6 582 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 ZFP42Q96MM3 310 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 FOXP3Q9BZS1 431 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 UBN1Q9NPG3 1134 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 KLC4Q9NSK0 619 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 FAM47DPA6NHR8 397 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 CLDN5O00501 218 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 IL4RP24394 825 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 GNL1P36915 607 aaPredicted RBP16.42■□□□□ 0.22
LRFN1-201ENST00000248668 HDAC4P56524 1084 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 YWHAGP61981 247 aaKnown RBP eCLIP16.42■□□□□ 0.22
LRFN1-201ENST00000248668 SNX17Q15036 470 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 ARHGEF18Q6ZSZ5 1173 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 PDIK1LQ8N165 341 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 PLD5Q8N7P1 536 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 C2orf69Q8N8R5 385 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 ARRDC4Q8NCT1 418 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 PCDH19Q8TAB3 1148 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 CCDC110Q8TBZ0 833 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 SLC35F5Q8WV83 523 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 PCDH18Q9HCL0 1135 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 ALG13Q9NP73 1137 aaKnown RBP16.42■□□□□ 0.22
LRFN1-201ENST00000248668 SLCO1B3Q9NPD5 702 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 EFR3BQ9Y2G0 817 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 MFHAS1Q9Y4C4 1052 aa16.42■□□□□ 0.22
LRFN1-201ENST00000248668 RRN3P2A6NIE6 340 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 MEIS3P2A8K0S8 358 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 ELK3P41970 407 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 NOMO1Q15155 1222 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 SMAD1Q15797 465 aaKnown RBP16.41■□□□□ 0.22
LRFN1-201ENST00000248668 PQLC3Q8N755 202 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 CFAP36Q96G28 342 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 SMC6Q96SB8 1091 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 TRIM56Q9BRZ2 755 aaKnown RBP16.41■□□□□ 0.22
LRFN1-201ENST00000248668 CCDC134Q9H6E4 229 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 TMPRSS4Q9NRS4 437 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 ATXN2Q99700 1313 aaKnown RBP16.41■□□□□ 0.22
LRFN1-201ENST00000248668 F2P00734 622 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 KRT4P19013 534 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 CLNS1AP54105 237 aaKnown RBP16.41■□□□□ 0.22
LRFN1-201ENST00000248668 PYROXD2Q8N2H3 581 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 SNX25Q9H3E2 840 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 RABGEF1Q9UJ41 708 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 GGA2Q9UJY4 613 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 NRCAMQ92823 1304 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 KPNA7A9QM74 516 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 PKDCCQ504Y2 493 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 TWF2Q6IBS0 349 aaKnown RBP16.41■□□□□ 0.22
LRFN1-201ENST00000248668 CEP128Q6ZU80 1094 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 ATP11CQ8NB49 1132 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 KBTBD7Q8WVZ9 684 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 PAFAH2Q99487 392 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 GRID1Q9ULK0 1009 aa16.41■□□□□ 0.22
LRFN1-201ENST00000248668 A6NJR5 290 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 APOL1O14791 398 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 ZBED1O96006 694 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 GBE1Q04446 702 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 SLC1A5Q15758 541 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 ZBTB6Q15916 424 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 TRPM8Q7Z2W7 1104 aa16.4■□□□□ 0.22
LRFN1-201ENST00000248668 PCGF5Q86SE9 256 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms