RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 NPTXRO95502 500 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 SNRPAP09012 282 aaKnown RBP13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 SAT1P21673 171 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 KIZQ2M2Z5 673 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 CELF3Q5SZQ8 465 aaKnown RBP13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 C6orf163Q5TEZ5 329 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 CLNKQ7Z7G1 428 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 MAGEC3Q8TD91 643 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 C12orf42Q96LP6 360 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 SHCBP1LQ9BZQ2 653 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 ARL8BQ9NVJ2 186 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 TTLL3Q9Y4R7 772 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 CYB561D2O14569 222 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 UGT1A9O60656 530 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 RBP5P82980 135 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 ADGRD1Q6QNK2 874 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 RIOX2Q8IUF8 465 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 RELL1Q8IUW5 271 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 SMC1BQ8NDV3 1235 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 PPCSQ9HAB8 311 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 UGT1A7Q9HAW7 530 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 UGT1A10Q9HAW8 530 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 UGT1A8Q9HAW9 530 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 ERAP1Q9NZ08 941 aa13.11□□□□□ -0.31
RAB3IP-201ENST00000247833 MYO18AQ92614 2054 aaKnown RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 B2RBV5 119 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 CCDC22O60826 627 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 KRT38O76015 456 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 PTPN4P29074 926 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 ATXN1P54253 815 aaKnown RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 ENPEPQ07075 957 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 ACVR2BQ13705 512 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 RCN1Q15293 331 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 HEATR6Q6AI08 1181 aaKnown RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 CATSPER4Q7RTX7 472 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 EXOC8Q8IYI6 725 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 PPFIBP2Q8ND30 876 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 HIPK4Q8NE63 616 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 OSBPL1AQ9BXW6 950 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 ZNF395Q9H8N7 513 aaPredicted RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 KIAA1217Q5T5P2 1943 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 TM9SF1O15321 606 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 CREB3O43889 395 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 B4GALT4O60513 344 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 ZNF143P52747 638 aaPredicted RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 TNFAIP2Q03169 654 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 ZRSR2Q15696 482 aaKnown RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 CA9Q16790 459 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 Q3C1V9 767 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 FAM47CQ5HY64 1035 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 MAP1SQ66K74 1059 aaPredicted RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 RFWD3Q6PCD5 774 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 DENND5BQ6ZUT9 1274 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 SLC26A11Q86WA9 606 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 ANKLE1Q8NAG6 615 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 AGR3Q8TD06 166 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 APOPT1Q96IL0 206 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 NSL1Q96IY1 281 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 AGAP3Q96P47 875 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 YIPF3Q9GZM5 350 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 LRMDAQ9H2I8 198 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 RNPEPL1Q9HAU8 725 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 ZMYND8Q9ULU4 1186 aaPredicted RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 BARX2Q9UMQ3 279 aaPredicted RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 CILPO75339 1184 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 PGM1P36871 562 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 AP1B1Q10567 949 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 MOGSQ13724 837 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 PLEKHG4Q58EX7 1191 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 SLC45A4Q5BKX6 768 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 TTC39BQ5VTQ0 682 aaPredicted RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 TSHZ1Q6ZSZ6 1077 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 ALYREFQ86V81 257 aaKnown RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 FAM131BQ86XD5 332 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 CRLF3Q8IUI8 442 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 DCAKDQ8WVC6 231 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 UTP4Q969X6 686 aaKnown RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 PRR11Q96HE9 360 aaPredicted RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 RNF157Q96PX1 679 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 SNRNP25Q9BV90 132 aaKnown RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 DENND2DQ9H6A0 471 aaPredicted RBP13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 KLK14Q9P0G3 267 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 LOXHD1Q8IVV2 1947 aa13.1□□□□□ -0.31
RAB3IP-201ENST00000247833 CCDC78A2IDD5 438 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 USP2O75604 605 aaPredicted RBP13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 DDNO94850 711 aaPredicted RBP13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 ARF4P18085 180 aaPredicted RBP13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 PPP1R15BQ5SWA1 713 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 PPP1R26Q5T8A7 1209 aaPredicted RBP13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 C16orf46Q6P387 395 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 RPAINQ86UA6 219 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 NIPA2Q8N8Q9 360 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 AFG1LQ8WV93 481 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 E2F7Q96AV8 911 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 NAF1Q96HR8 494 aaKnown RBP13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 L3MBTL3Q96JM7 780 aaPredicted RBP13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 LHX5Q9H2C1 402 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 EURLQ9NYK6 297 aa13.09□□□□□ -0.31
RAB3IP-201ENST00000247833 G3BP2Q9UN86 482 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms