RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 SESTD1Q86VW0 696 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 APLFQ8IW19 511 aaPredicted RBP12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 TMEM35BQ8NCS4 154 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 TTC16Q8NEE8 873 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 ZNF778Q96MU6 729 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 PANX3Q96QZ0 392 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 TRIM55Q9BYV6 548 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 NIF3L1Q9GZT8 377 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 LRCH1Q9Y2L9 728 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 PLLPQ9Y342 182 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 WASF2Q9Y6W5 498 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 A0A0G2JND7 137 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 BUD23O43709 281 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 LPXNO60711 386 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 OAZ1P54368 228 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 YWHAZP63104 245 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 PTK7Q13308 1070 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 PPP2R5DQ14738 602 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 THEMIS2Q5TEJ8 643 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 FYB2Q5VWT5 728 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 FAM71DQ8N9W8 422 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 RNF149Q8NC42 400 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 AGBL3Q8NEM8 1001 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 ZNF395Q9H8N7 513 aaPredicted RBP12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 GGA3Q9NZ52 723 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 SCN4AP35499 1836 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 TSC2P49815 1807 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 F8W8V4 182 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 PRKCGP05129 697 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 SERPINB4P48594 390 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 ARFIP2P53365 341 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 SESN3P58005 492 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 SH3PXD2AQ5TCZ1 1133 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 NPNTQ6UXI9 565 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 FLAD1Q8NFF5 587 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 COPS5Q92905 334 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 CYTH2Q99418 400 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 ACO2Q99798 780 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 SIX4Q9UIU6 781 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 CHMP2BQ9UQN3 213 aa12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 FNDC1Q4ZHG4 1894 aaPredicted RBP12.45□□□□□ -0.42
SEC61A1-201ENST00000243253 DCAF8L1A6NGE4 600 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 FCHO1O14526 889 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 DKC1O60832 514 aaKnown RBP eCLIP12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 MYL2P10916 166 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 AP3M2P53677 418 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 BASP1P80723 227 aaKnown RBP12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 KLC1Q07866 573 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 TTC13Q8NBP0 860 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 SLC4A11Q8NBS3 891 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 TWNKQ96RR1 684 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 TUBB6Q9BUF5 446 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 MECRQ9BV79 373 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 KCNK4Q9NYG8 393 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 A8MXQ7 604 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 CHADO15335 359 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 STAM2O75886 525 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 PDHA1P08559 390 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 TROVE2P10155 538 aaKnown RBP eCLIP12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 MIPP30301 263 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 RGS7P49802 495 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 MMRN1Q13201 1228 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 BBS9Q3SYG4 887 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 RNF220Q5VTB9 566 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 CTAGE3PQ8IX95 158 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 NSUN6Q8TEA1 469 aaKnown RBP12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 SRPK1Q96SB4 655 aaKnown RBP12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 GINM1Q9NU53 330 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 ARMCX1Q9P291 453 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 WDR35Q9P2L0 1181 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 STOML1Q9UBI4 398 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 ZNF212Q9UDV6 495 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 HMGXB4Q9UGU5 601 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 CAPN9O14815 690 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 UGT1A9O60656 530 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 KRT7P08729 469 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 L1CAMP32004 1257 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 SPDYE1Q8NFV5 336 aaPredicted RBP12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 C1orf21Q9H246 121 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 UGT1A7Q9HAW7 530 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 UGT1A10Q9HAW8 530 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 UGT1A8Q9HAW9 530 aa12.44□□□□□ -0.42
SEC61A1-201ENST00000243253 PDCD11Q14690 1871 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 RALGAPA2Q2PPJ7 1873 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 KRT3P12035 628 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 CLCN3P51790 818 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 ZNF200P98182 395 aaPredicted RBP12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 BTKQ06187 659 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 TMEM154Q6P9G4 183 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 ILDR2Q71H61 639 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 PLD5Q8N7P1 536 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 RBM15BQ8NDT2 890 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 C12orf42Q96LP6 360 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 YIPF3Q9GZM5 350 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 METTL5Q9NRN9 209 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.43□□□□□ -0.428e-6■□□□□ 9.8
SEC61A1-201ENST00000243253 KCNG1Q9UIX4 513 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 ZNF112Q9UJU3 913 aa12.43□□□□□ -0.42
SEC61A1-201ENST00000243253 IGKV6-21A0A0C4DH24 114 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms