RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 RTN2O75298 545 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 KRT19P08727 400 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 PNPLA4P41247 253 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 NOP2P46087 812 aaKnown RBP18.33■□□□□ 0.52
HOXC6-201ENST00000243108 CLCN6P51797 869 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 NUBP1P53384 320 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 HADHBP55084 474 aaKnown RBP18.33■□□□□ 0.52
HOXC6-201ENST00000243108 FMO1Q01740 532 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 CDR2Q01850 454 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 STXBP5Q5T5C0 1151 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 DNAJB7Q7Z6W7 309 aaPredicted RBP18.33■□□□□ 0.52
HOXC6-201ENST00000243108 OSTM1Q86WC4 334 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 LRRC52Q8N7C0 313 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 LPIN3Q9BQK8 851 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 PARD6BQ9BYG5 372 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 APOBEC3GQ9HC16 384 aaKnown RBP18.33■□□□□ 0.52
HOXC6-201ENST00000243108 SEPT11Q9NVA2 429 aaKnown RBP18.33■□□□□ 0.52
HOXC6-201ENST00000243108 ARGLU1Q9NWB6 273 aaPredicted RBP18.33■□□□□ 0.52
HOXC6-201ENST00000243108 GDAP2Q9NXN4 497 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 RNF14Q9UBS8 474 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 MIA3Q5JRA6 1907 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 ZFHX2Q9C0A1 2572 aaPredicted RBP18.33■□□□□ 0.52
HOXC6-201ENST00000243108 CFAP54Q96N23 3096 aa18.33■□□□□ 0.52
HOXC6-201ENST00000243108 A0A1W2PRU2 124 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 TMCO5BA8MYB1 307 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 CES2O00748 559 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 RRP9O43818 475 aaKnown RBP18.32■□□□□ 0.52
HOXC6-201ENST00000243108 TMEM191BP0C7N4 346 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 ALDH1A3P47895 512 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 PDE6CP51160 858 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 EPHB3P54753 998 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 GAREM2Q75VX8 874 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 THEM5Q8N1Q8 247 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 PSMG2Q969U7 264 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 ELSPBP1Q96BH3 223 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 ELMO3Q96BJ8 720 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 CALR3Q96L12 384 aaKnown RBP18.32■□□□□ 0.52
HOXC6-201ENST00000243108 FOXQ1Q9C009 403 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 PDCL3Q9H2J4 239 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 HSFX1Q9UBD0 423 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 RAB21Q9UL25 225 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 SNX9Q9Y5X1 595 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 OBSL1O75147 1896 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 TICRRQ7Z2Z1 1910 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 FRYLO94915 3013 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 SHISA7A6NL88 538 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 STK25O00506 426 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 MMEP08473 750 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 GLULP15104 373 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 ACO1P21399 889 aaKnown RBP18.32■□□□□ 0.52
HOXC6-201ENST00000243108 ACAT1P24752 427 aaKnown RBP18.32■□□□□ 0.52
HOXC6-201ENST00000243108 VIPR2P41587 438 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 STARD6P59095 220 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 RBP5P82980 135 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 CUL2Q13617 745 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 NCOA4Q13772 614 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 GRM2Q14416 872 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 SOWAHAQ2M3V2 549 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 SMYD5Q6GMV2 418 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 SYCE1Q8N0S2 351 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 SLC35G2Q8TBE7 412 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 ARHGEF26Q96DR7 871 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 RSPRY1Q96DX4 576 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 PKMYT1Q99640 499 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 SEPT5Q99719 369 aaPredicted RBP18.32■□□□□ 0.52
HOXC6-201ENST00000243108 ARID3AQ99856 593 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 THAP2Q9H0W7 228 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 ACP6Q9NPH0 428 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 DLGAP2Q9P1A6 1054 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 CNTN6Q9UQ52 1028 aa18.32■□□□□ 0.52
HOXC6-201ENST00000243108 NUP210Q8TEM1 1887 aaPredicted RBP18.31■□□□□ 0.52
HOXC6-201ENST00000243108 CACNA1IQ9P0X4 2223 aa18.31■□□□□ 0.52
HOXC6-201ENST00000243108 FTLP02792 175 aaPredicted RBP18.31■□□□□ 0.52
HOXC6-201ENST00000243108 DCNP07585 359 aaKnown RBP18.31■□□□□ 0.52
HOXC6-201ENST00000243108 TBXAS1P24557 533 aaPredicted RBP18.31■□□□□ 0.52
HOXC6-201ENST00000243108 NOP14P78316 857 aaKnown RBP18.31■□□□□ 0.52
HOXC6-201ENST00000243108 PLD1Q13393 1074 aa18.31■□□□□ 0.52
HOXC6-201ENST00000243108 MGAT5BQ3V5L5 792 aa18.31■□□□□ 0.52
HOXC6-201ENST00000243108 SLC44A4Q53GD3 710 aa18.31■□□□□ 0.52
HOXC6-201ENST00000243108 SPOPLQ6IQ16 392 aa18.31■□□□□ 0.52
HOXC6-201ENST00000243108 VITQ6UXI7 678 aa18.31■□□□□ 0.52
HOXC6-201ENST00000243108 LIMS2Q7Z4I7 341 aa18.31■□□□□ 0.52
HOXC6-201ENST00000243108 RHOT2Q8IXI1 618 aa18.31■□□□□ 0.52
HOXC6-201ENST00000243108 CCDC105Q8IYK2 499 aa18.31■□□□□ 0.52
HOXC6-201ENST00000243108 LEMD2Q8NC56 503 aa18.31■□□□□ 0.52
HOXC6-201ENST00000243108 STKLD1Q8NE28 680 aa18.31■□□□□ 0.52
HOXC6-201ENST00000243108 ZSCAN18Q8TBC5 510 aaPredicted RBP18.31■□□□□ 0.52
HOXC6-201ENST00000243108 SMARCD2Q92925 531 aa18.31■□□□□ 0.52
HOXC6-201ENST00000243108 ANKRD36BP1Q96IX9 119 aa18.31■□□□□ 0.52
HOXC6-201ENST00000243108 DDX23Q9BUQ8 820 aaKnown RBP18.31■□□□□ 0.52
HOXC6-201ENST00000243108 ABCB6Q9NP58 842 aa18.31■□□□□ 0.52
HOXC6-201ENST00000243108 DDX43Q9NXZ2 648 aaKnown RBP18.31■□□□□ 0.52
HOXC6-201ENST00000243108 ABI2Q9NYB9 513 aaPredicted RBP18.31■□□□□ 0.52
HOXC6-201ENST00000243108 MTF2Q9Y483 593 aaPredicted RBP18.31■□□□□ 0.52
HOXC6-201ENST00000243108 PHACTR2O75167 634 aa18.3■□□□□ 0.52
HOXC6-201ENST00000243108 ASS1P00966 412 aaKnown RBP18.3■□□□□ 0.52
HOXC6-201ENST00000243108 CST3P01034 146 aaPredicted RBP18.3■□□□□ 0.52
HOXC6-201ENST00000243108 TUBBP07437 444 aa18.3■□□□□ 0.52
HOXC6-201ENST00000243108 HAPLN1P10915 354 aaPredicted RBP18.3■□□□□ 0.52
HOXC6-201ENST00000243108 KRT5P13647 590 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms