RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 SPATA21Q7Z572 469 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 SUGP1Q8IWZ8 645 aaKnown RBP16.86■□□□□ 0.29
UBE3D-201ENST00000237186 SCUBE3Q8IX30 993 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 FBXO36Q8NEA4 188 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 GDAP1Q8TB36 358 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.86■□□□□ 0.29
UBE3D-201ENST00000237186 FAM172AQ8WUF8 416 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 C18orf25Q96B23 403 aaPredicted RBP16.86■□□□□ 0.29
UBE3D-201ENST00000237186 OSMRQ99650 979 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 PTPN18Q99952 460 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 PAK5Q9P286 719 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 GTF2IRD1Q9UHL9 959 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 ARL2BPQ9Y2Y0 163 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 HAS3O00219 553 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 BANF1O75531 89 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 RECQL4O94761 1208 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 CYP2C9P11712 490 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 KCNE1P15382 129 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 SSTR1P30872 391 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 FOXN2P32314 431 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 MAGEA6P43360 314 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 HDAC4P56524 1084 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 CDO1Q16878 200 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 PALM2Q8IXS6 379 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 GBP7Q8N8V2 638 aaPredicted RBP16.86■□□□□ 0.29
UBE3D-201ENST00000237186 PCDH19Q8TAB3 1148 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 SLC40A1Q9NP59 571 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 FAM49BQ9NUQ9 324 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 GINS2Q9Y248 185 aa16.86■□□□□ 0.29
UBE3D-201ENST00000237186 A8MXQ7 604 aa16.85■□□□□ 0.29
UBE3D-201ENST00000237186 APOL1O14791 398 aa16.85■□□□□ 0.29
UBE3D-201ENST00000237186 SPAG6O75602 509 aa16.85■□□□□ 0.29
UBE3D-201ENST00000237186 ATP2A2P16615 1042 aaKnown RBP16.85■□□□□ 0.29
UBE3D-201ENST00000237186 PNPLA4P41247 253 aa16.85■□□□□ 0.29
UBE3D-201ENST00000237186 BCAR1P56945 870 aa16.85■□□□□ 0.29
UBE3D-201ENST00000237186 ATP11AP98196 1134 aa16.85■□□□□ 0.29
UBE3D-201ENST00000237186 BST2Q10589 180 aaKnown RBP16.85■□□□□ 0.29
UBE3D-201ENST00000237186 FBXO47Q5MNV8 452 aa16.85■□□□□ 0.29
UBE3D-201ENST00000237186 MORN1Q5T089 497 aa16.85■□□□□ 0.29
UBE3D-201ENST00000237186 OR6B3Q8NGW1 331 aa16.85■□□□□ 0.29
UBE3D-201ENST00000237186 FBF1Q8TES7 1133 aa16.85■□□□□ 0.29
UBE3D-201ENST00000237186 MZB1Q8WU39 189 aa16.85■□□□□ 0.29
UBE3D-201ENST00000237186 KBTBD7Q8WVZ9 684 aa16.85■□□□□ 0.29
UBE3D-201ENST00000237186 SNRNP25Q9BV90 132 aaKnown RBP16.85■□□□□ 0.29
UBE3D-201ENST00000237186 NGRNQ9NPE2 291 aaKnown RBP16.85■□□□□ 0.29
UBE3D-201ENST00000237186 HES2Q9Y543 173 aa16.85■□□□□ 0.29
UBE3D-201ENST00000237186 SMIM28A0A1B0GU29 152 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 SPAG7O75391 227 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 TOMM70O94826 608 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 ACADSBP45954 432 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 BCAT1P54687 386 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 BASP1P80723 227 aaKnown RBP16.84■□□□□ 0.29
UBE3D-201ENST00000237186 DPYSL2Q16555 572 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 RNF43Q68DV7 783 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 CGB2Q6NT52 195 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 SCYL2Q6P3W7 929 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 C4orf22Q6V702 233 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 ZC3H18Q86VM9 953 aaKnown RBP16.84■□□□□ 0.29
UBE3D-201ENST00000237186 FUKQ8N0W3 1084 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 ALKBH8Q96BT7 664 aaKnown RBP16.84■□□□□ 0.29
UBE3D-201ENST00000237186 HSFY1Q96LI6 401 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 TRIM6Q9C030 488 aaPredicted RBP16.84■□□□□ 0.29
UBE3D-201ENST00000237186 NXF3Q9H4D5 531 aaKnown RBP16.84■□□□□ 0.29
UBE3D-201ENST00000237186 HAUS2Q9NVX0 235 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.84■□□□□ 0.29
UBE3D-201ENST00000237186 GJD2Q9UKL4 321 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 STARD13Q9Y3M8 1113 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 TEX264Q9Y6I9 313 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 DCAF8L1A6NGE4 600 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 KPNA7A9QM74 516 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 H7C0C1 242 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 XPOTO43592 962 aaKnown RBP16.84■□□□□ 0.29
UBE3D-201ENST00000237186 ATP5OP48047 213 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 HIC1Q14526 733 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 SNX17Q15036 470 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 PDK4Q16654 411 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 CA9Q16790 459 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 BBS9Q3SYG4 887 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 CAPN12Q6ZSI9 719 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 CYTH2Q99418 400 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 PAFAH2Q99487 392 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 B3GNT5Q9BYG0 378 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 DNAI2Q9GZS0 605 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 PNPLA8Q9NP80 782 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 NMRK2Q9NPI5 230 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 ABCF3Q9NUQ8 709 aa16.84■□□□□ 0.29
UBE3D-201ENST00000237186 A0A1W2PPM1 405 aa16.83■□□□□ 0.28
UBE3D-201ENST00000237186 FAM163BP0C2L3 166 aa16.83■□□□□ 0.28
UBE3D-201ENST00000237186 ZNF865P0CJ78 1059 aaPredicted RBP16.83■□□□□ 0.28
UBE3D-201ENST00000237186 FGFR1P11362 822 aa16.83■□□□□ 0.28
UBE3D-201ENST00000237186 ZFXP17010 805 aaPredicted RBP16.83■□□□□ 0.28
UBE3D-201ENST00000237186 RPA3P35244 121 aaPredicted RBP16.83■□□□□ 0.28
UBE3D-201ENST00000237186 GNL1P36915 607 aaPredicted RBP16.83■□□□□ 0.28
UBE3D-201ENST00000237186 MSH2P43246 934 aa16.83■□□□□ 0.28
UBE3D-201ENST00000237186 NR2C2P49116 596 aa16.83■□□□□ 0.28
UBE3D-201ENST00000237186 ADCY1Q08828 1119 aa16.83■□□□□ 0.28
UBE3D-201ENST00000237186 MAP2K5Q13163 448 aa16.83■□□□□ 0.28
UBE3D-201ENST00000237186 MFSD10Q14728 455 aa16.83■□□□□ 0.28
UBE3D-201ENST00000237186 GLRA4Q5JXX5 417 aa16.83■□□□□ 0.28
UBE3D-201ENST00000237186 UBXN11Q5T124 520 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms