RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 LRRC43Q8N309 656 aa16.39■□□□□ 0.22
DDX1-201ENST00000233084 DCUN1D1Q96GG9 259 aa16.39■□□□□ 0.22
DDX1-201ENST00000233084 CBWD1Q9BRT8 395 aa16.39■□□□□ 0.22
DDX1-201ENST00000233084 AS3MTQ9HBK9 375 aa16.39■□□□□ 0.22
DDX1-201ENST00000233084 NMRK2Q9NPI5 230 aa16.39■□□□□ 0.22
DDX1-201ENST00000233084 FAIMQ9NVQ4 179 aa16.39■□□□□ 0.22
DDX1-201ENST00000233084 PCDHA1Q9Y5I3 950 aa16.39■□□□□ 0.22
DDX1-201ENST00000233084 IKBKGQ9Y6K9 419 aa16.39■□□□□ 0.22
DDX1-201ENST00000233084 A0A1B0GTW7 788 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 CYB561D2O14569 222 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 SRGAP2CP0DJJ0 459 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 SRGAP2BP0DMP2 458 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 TAL1P17542 331 aaPredicted RBP16.39■□□□□ 0.21
DDX1-201ENST00000233084 ALDH1A3P47895 512 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 MXI1P50539 228 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 VCPP55072 806 aaKnown RBP16.39■□□□□ 0.21
DDX1-201ENST00000233084 FAAP100Q0VG06 881 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 C16orf72Q14CZ0 275 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 LPAR1Q92633 364 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 CCDC127Q96BQ5 260 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 ALKBH8Q96BT7 664 aaKnown RBP16.39■□□□□ 0.21
DDX1-201ENST00000233084 FBXO28Q9NVF7 368 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 AP1G1O43747 822 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 DNAJA2O60884 412 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 E2F6O75461 281 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 PDGFRBP09619 1106 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 DHRS4L1P0CG22 281 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 ZFXP17010 805 aaPredicted RBP16.39■□□□□ 0.21
DDX1-201ENST00000233084 IREB2P48200 963 aaKnown RBP16.39■□□□□ 0.21
DDX1-201ENST00000233084 MYBPC1Q00872 1141 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 GSTM4Q03013 218 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 SNAPC2Q13487 334 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 CHI3L2Q15782 390 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 CCDC92Q53HC0 331 aaPredicted RBP16.39■□□□□ 0.21
DDX1-201ENST00000233084 FAM91A1Q658Y4 838 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 PPP1R18Q6NYC8 613 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 ZCCHC23Q6ZST2 131 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 AMIGO2Q86SJ2 522 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 PATL1Q86TB9 770 aaKnown RBP16.39■□□□□ 0.21
DDX1-201ENST00000233084 CHSY1Q86X52 802 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 ATP11CQ8NB49 1132 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 PLEKHO2Q8TD55 490 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 SEMA4DQ92854 862 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 APOPT1Q96IL0 206 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 FIZ1Q96SL8 496 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 SLC13A1Q9BZW2 595 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 AFG3L2Q9Y4W6 797 aa16.39■□□□□ 0.21
DDX1-201ENST00000233084 WDR46O15213 610 aaKnown RBP16.38■□□□□ 0.21
DDX1-201ENST00000233084 PLA2G6O60733 806 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 COL6A2P12110 1019 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 HOXD12P35452 270 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 C1orf186Q6ZWK4 172 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 ANO5Q75V66 913 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 ZNF410Q86VK4 478 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 RHOT1Q8IXI2 618 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 MAML3Q96JK9 1138 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 MRPS26Q9BYN8 205 aaKnown RBP16.38■□□□□ 0.21
DDX1-201ENST00000233084 ACSS3Q9H6R3 686 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 HEY1Q9Y5J3 304 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 MAD1L1Q9Y6D9 718 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 LOC100653049A0A140TA62 436 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 MSH4O15457 936 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 FAM155BO75949 473 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 KRT34O76011 436 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 POLR2MP0CAP2 368 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 TCF4P15884 667 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 PORP16435 677 aaPredicted RBP16.38■□□□□ 0.21
DDX1-201ENST00000233084 MFAP3P55082 362 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 PDK1Q15118 436 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 KLHL38Q2WGJ6 581 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 ALLCQ8N6M5 410 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 GIPC3Q8TF64 312 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 WDR83Q9BRX9 315 aaKnown RBP16.38■□□□□ 0.21
DDX1-201ENST00000233084 C20orf27Q9GZN8 174 aa16.38■□□□□ 0.21
DDX1-201ENST00000233084 SAE1Q9UBE0 346 aaPredicted RBP16.38■□□□□ 0.21
DDX1-201ENST00000233084 LOC285556D6RIA3 1793 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 COL11A1P12107 1806 aaPredicted RBP16.37■□□□□ 0.21
DDX1-201ENST00000233084 COPEO14579 308 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 ZMPSTE24O75844 475 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 CRTAMO95727 393 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 ENTPD1P49961 510 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 CYTH1Q15438 398 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 CLEC16AQ2KHT3 1053 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 C1orf220Q5T0J3 134 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 C6orf52Q5T4I8 152 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 SLC15A3Q8IY34 581 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 MCOLN2Q8IZK6 566 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 MARVELD2Q8N4S9 558 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 RAB3IL1Q8TBN0 382 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 FAM84AQ96KN4 292 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 ZFRQ96KR1 1074 aaKnown RBP16.37■□□□□ 0.21
DDX1-201ENST00000233084 SRPK1Q96SB4 655 aaKnown RBP16.37■□□□□ 0.21
DDX1-201ENST00000233084 FEM1BQ9UK73 627 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 POMPQ9Y244 141 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 AK5Q9Y6K8 562 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 FOXD2O60548 495 aaPredicted RBP16.37■□□□□ 0.21
DDX1-201ENST00000233084 CDH2P19022 906 aaPredicted RBP16.37■□□□□ 0.21
DDX1-201ENST00000233084 HMGCS2P54868 508 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 IRX4P78413 519 aa16.37■□□□□ 0.21
DDX1-201ENST00000233084 XIAPP98170 497 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms