RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 BNIPLQ7Z465 357 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 ILDR1Q86SU0 546 aaPredicted RBP13.8□□□□□ -0.2
NEK4-201ENST00000233027 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.8□□□□□ -0.2
NEK4-201ENST00000233027 EHD4Q9H223 541 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 TMEM245Q9H330 911 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 LRRC40Q9H9A6 602 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 ENDOD1O94919 500 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 CPA3P15088 417 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 YY1P25490 414 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 SLC1A6P48664 564 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 SLC44A4Q53GD3 710 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 CACHD1Q5VU97 1274 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 NAIF1Q69YI7 327 aaPredicted RBP13.8□□□□□ -0.2
NEK4-201ENST00000233027 SLC44A2Q8IWA5 706 aaPredicted RBP13.8□□□□□ -0.2
NEK4-201ENST00000233027 CHST13Q8NET6 341 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 CISHQ9NSE2 258 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 IMPAD1Q9NX62 359 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 CLTCQ00610 1675 aaKnown RBP13.8□□□□□ -0.2
NEK4-201ENST00000233027 NAMPTP43490 491 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 SNAPC2Q13487 334 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 BBS7Q8IWZ6 715 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 COLGALT1Q8NBJ5 622 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 RPRD1AQ96P16 312 aaPredicted RBP13.8□□□□□ -0.2
NEK4-201ENST00000233027 MYLK2Q9H1R3 596 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 NMRK2Q9NPI5 230 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 AAR2Q9Y312 384 aaKnown RBP13.8□□□□□ -0.2
NEK4-201ENST00000233027 TIMM44O43615 452 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 STAG3L1P0CL83 205 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 NFIAQ12857 509 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 TSEN2Q8NCE0 465 aaKnown RBP13.79□□□□□ -0.2
NEK4-201ENST00000233027 RDM1Q8NG50 284 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 RXFP2Q8WXD0 754 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 PRG3Q9Y2Y8 225 aaPredicted RBP13.79□□□□□ -0.2
NEK4-201ENST00000233027 PTPRUQ92729 1446 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 PPRC1Q5VV67 1664 aaKnown RBP13.79□□□□□ -0.2
NEK4-201ENST00000233027 CLPTM1O96005 669 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 GZMAP12544 262 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 CACNA2D1P54289 1103 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 PPP4CP60510 307 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 ISLR2Q6UXK2 745 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 PACS2Q86VP3 889 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 TCP10LQ8TDR4 215 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 TMEM79Q9BSE2 394 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 HACL1Q9UJ83 578 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 STRNO43815 780 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 ODC1P11926 461 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 MUTP22033 750 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 CYP2F1P24903 491 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 TAF1CQ15572 869 aaPredicted RBP13.79□□□□□ -0.2
NEK4-201ENST00000233027 AADACL2Q6P093 401 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 ATP6V0D2Q8N8Y2 350 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 RAET1EQ8TD07 263 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 C2orf81A6NN90 581 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 CSDE1O75534 798 aaKnown RBP13.79□□□□□ -0.2
NEK4-201ENST00000233027 EPB42P16452 691 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 HOXD10P28358 340 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 PNPLA4P41247 253 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 PRIM2P49643 509 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 GMPSP49915 693 aaPredicted RBP13.79□□□□□ -0.2
NEK4-201ENST00000233027 N4BP2L1Q5TBK1 243 aaPredicted RBP13.79□□□□□ -0.2
NEK4-201ENST00000233027 UGT3A1Q6NUS8 523 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 HASPINQ8TF76 798 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 CTNNAL1Q9UBT7 734 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 SLC24A2Q9UI40 661 aa13.79□□□□□ -0.2
NEK4-201ENST00000233027 UBQLN1Q9UMX0 589 aaKnown RBP13.79□□□□□ -0.2
NEK4-201ENST00000233027 WDR27A2RRH5 827 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 SPTLC1O15269 473 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 CPSF4O95639 269 aaKnown RBP13.78□□□□□ -0.2
NEK4-201ENST00000233027 SUPT20HL2P0C7V6 817 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 CYP2C8P10632 490 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 MLNP12872 115 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 MMRN1Q13201 1228 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 TDRD10Q5VZ19 366 aaKnown RBP13.78□□□□□ -0.2
NEK4-201ENST00000233027 MIB1Q86YT6 1006 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 ADGRF2Q8IZF7 708 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 VPS37AQ8NEZ2 397 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 AENQ8WTP8 325 aaKnown RBP13.78□□□□□ -0.2
NEK4-201ENST00000233027 UBE2OQ9C0C9 1292 aaKnown RBP13.78□□□□□ -0.2
NEK4-201ENST00000233027 GDF3Q9NR23 364 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 NINJ2Q9NZG7 142 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 AP4S1Q9Y587 144 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 MRPL42Q9Y6G3 142 aaKnown RBP13.78□□□□□ -0.2
NEK4-201ENST00000233027 CEMIPQ8WUJ3 1361 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 CHI3L1P36222 383 aaPredicted RBP13.78□□□□□ -0.2
NEK4-201ENST00000233027 HPCAP84074 193 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 TBX2Q13207 712 aaPredicted RBP13.78□□□□□ -0.2
NEK4-201ENST00000233027 MTFR1Q15390 333 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 AGKQ53H12 422 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 MRNIPQ6NTE8 343 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 PTAR1Q7Z6K3 402 aaPredicted RBP13.78□□□□□ -0.2
NEK4-201ENST00000233027 DEFB129Q9H1M3 183 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 SCUBE2Q9NQ36 999 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 ARMCX1Q9P291 453 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 C1orf167Q5SNV9 1468 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 ZNF682O95780 498 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 GHRP10912 638 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 ELK3P41970 407 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 CHRNB3Q05901 458 aa13.78□□□□□ -0.2
NEK4-201ENST00000233027 PAN2Q504Q3 1202 aaKnown RBP13.78□□□□□ -0.2
NEK4-201ENST00000233027 GLB1LQ6UWU2 654 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms