RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 USP6NLQ92738 828 aa23.14■■□□□ 1.29
CCDC9-201ENST00000221922 LRRC37BQ96QE4 947 aa23.14■■□□□ 1.29
CCDC9-201ENST00000221922 CALN1Q9BXU9 219 aa23.14■■□□□ 1.29
CCDC9-201ENST00000221922 CDHR5Q9HBB8 845 aa23.14■■□□□ 1.29
CCDC9-201ENST00000221922 SNTG2Q9NY99 539 aa23.14■■□□□ 1.29
CCDC9-201ENST00000221922 NOP53Q9NZM5 478 aaKnown RBP23.14■■□□□ 1.29
CCDC9-201ENST00000221922 GINS2Q9Y248 185 aa23.14■■□□□ 1.29
CCDC9-201ENST00000221922 STK38LQ9Y2H1 464 aa23.14■■□□□ 1.29
CCDC9-201ENST00000221922 SCN1AP35498 2009 aa23.14■■□□□ 1.29
CCDC9-201ENST00000221922 MANSC4A6NHS7 340 aaPredicted RBP23.13■■□□□ 1.29
CCDC9-201ENST00000221922 E5RJQ4 531 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 DCTN3O75935 186 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 PDGFRAP16234 1089 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 CYP3A5P20815 502 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 AXLP30530 894 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 SNX16P57768 344 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 TFDP2Q14188 446 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 GOLGA7BQ2TAP0 167 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 FAM47CQ5HY64 1035 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 FAM183BPQ6ZVS7 135 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 RASAL3Q86YV0 1011 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 NAT8LQ8N9F0 302 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 RXFP2Q8WXD0 754 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 OSMRQ99650 979 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 CYLDQ9NQC7 956 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 E7ESA3 106 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 HGSO14964 777 aaPredicted RBP23.13■■□□□ 1.29
CCDC9-201ENST00000221922 ENDOD1O94919 500 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 ZWINTO95229 277 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 ALDH3A1P30838 453 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 PHBP35232 272 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 SPDYAQ5MJ70 313 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 ANKMY2Q8IV38 441 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 ATP11CQ8NB49 1132 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 NSMCE1Q8WV22 266 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 C10orf82Q8WW14 230 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 UTP4Q969X6 686 aaKnown RBP23.13■■□□□ 1.29
CCDC9-201ENST00000221922 ERP27Q96DN0 273 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 EIF2AQ9BY44 585 aaKnown RBP23.13■■□□□ 1.29
CCDC9-201ENST00000221922 PDCD11Q14690 1871 aaKnown RBP23.13■■□□□ 1.29
CCDC9-201ENST00000221922 TRPM7Q96QT4 1865 aa23.13■■□□□ 1.29
CCDC9-201ENST00000221922 PRPSAP2O60256 369 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 BANF1O75531 89 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 DESP17661 470 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 RPL22P35268 128 aaKnown RBP23.12■■□□□ 1.29
CCDC9-201ENST00000221922 PSEN2P49810 448 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 CPT1AP50416 773 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 GDF10P55107 478 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 TAF1CQ15572 869 aaPredicted RBP23.12■■□□□ 1.29
CCDC9-201ENST00000221922 HHATQ5VTY9 493 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 ANKRD22Q5VYY1 191 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 ADGRD1Q6QNK2 874 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 LRRC52Q8N7C0 313 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 PYROXD1Q8WU10 500 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 ZMAT2Q96NC0 199 aaKnown RBP23.12■■□□□ 1.29
CCDC9-201ENST00000221922 Q9Y3F1 56 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 GOLGA8MH3BSY2 632 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 DPYSL4O14531 572 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 PFKMP08237 780 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 CDH6P55285 790 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 ATP11AP98196 1134 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 GAD2Q05329 585 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 TAF5Q15542 800 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 MSS51Q4VC12 460 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 FNBP1LQ5T0N5 605 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 ALKAL1Q6UXT8 129 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 VSIG1Q86XK7 387 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 MAP7D3Q8IWC1 876 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 BEST2Q8NFU1 509 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 INPP5DQ92835 1189 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 TMEM237Q96Q45 408 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 PEBP4Q96S96 227 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 ACSS3Q9H6R3 686 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.12■■□□□ 1.29
CCDC9-201ENST00000221922 CNTN3Q9P232 1028 aa23.12■■□□□ 1.29
CCDC9-201ENST00000221922 RBP3P10745 1247 aa23.11■■□□□ 1.29
CCDC9-201ENST00000221922 KRT4P19013 534 aa23.11■■□□□ 1.29
CCDC9-201ENST00000221922 STIP1P31948 543 aaKnown RBP23.11■■□□□ 1.29
CCDC9-201ENST00000221922 PSMC4P43686 418 aa23.11■■□□□ 1.29
CCDC9-201ENST00000221922 LVRNQ6Q4G3 990 aa23.11■■□□□ 1.29
CCDC9-201ENST00000221922 AGGF1Q8N302 714 aaeCLIP23.11■■□□□ 1.29
CCDC9-201ENST00000221922 SPATA18Q8TC71 538 aa23.11■■□□□ 1.29
CCDC9-201ENST00000221922 MZB1Q8WU39 189 aa23.11■■□□□ 1.29
CCDC9-201ENST00000221922 ZNF75CPQ92670 426 aaPredicted RBP23.11■■□□□ 1.29
CCDC9-201ENST00000221922 LENG1Q96BZ8 264 aaPredicted RBP23.11■■□□□ 1.29
CCDC9-201ENST00000221922 WDR83Q9BRX9 315 aaKnown RBP23.11■■□□□ 1.29
CCDC9-201ENST00000221922 CXCL16Q9H2A7 254 aa23.11■■□□□ 1.29
CCDC9-201ENST00000221922 SNX9Q9Y5X1 595 aa23.11■■□□□ 1.29
CCDC9-201ENST00000221922 FGFR1P11362 822 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 TSHRP16473 764 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 GBP2P32456 591 aaPredicted RBP23.1■■□□□ 1.29
CCDC9-201ENST00000221922 ROR1Q01973 937 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 HIC1Q14526 733 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 PDK2Q15119 407 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 NOMO1Q15155 1222 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 KLHL38Q2WGJ6 581 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 UNC45BQ8IWX7 931 aa23.1■■□□□ 1.29
CCDC9-201ENST00000221922 THOC1Q96FV9 657 aaKnown RBP23.1■■□□□ 1.29
CCDC9-201ENST00000221922 RSRC1Q96IZ7 334 aaKnown RBP23.1■■□□□ 1.29
CCDC9-201ENST00000221922 HESX1Q9UBX0 185 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms