RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 DAB1O75553 588 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 CSF1RP07333 972 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 NFICP08651 508 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 TGFB3P10600 412 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 STIP1P31948 543 aaKnown RBP10.89□□□□□ -0.67
TRPS1-201ENST00000220888 CLCN6P51797 869 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 CENPCQ03188 943 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 CYTH1Q15438 398 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 COMMD2Q86X83 199 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 PPIL6Q8IXY8 311 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 COLGALT2Q8IYK4 626 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 DPP10Q8N608 796 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 CYGBQ8WWM9 190 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 CENPTQ96BT3 561 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 ZNF333Q96JL9 665 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 ZMAT2Q96NC0 199 aaKnown RBP10.89□□□□□ -0.67
TRPS1-201ENST00000220888 PGLYRP2Q96PD5 576 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 EPN3Q9H201 632 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 RPS6KL1Q9Y6S9 549 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 AIM2O14862 343 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 KLHL2O95198 593 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 STAU1O95793 577 aaKnown RBP10.89□□□□□ -0.67
TRPS1-201ENST00000220888 GLP2RO95838 553 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 PDK2Q15119 407 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 DDX42Q86XP3 938 aaKnown RBP eCLIP10.89□□□□□ -0.67
TRPS1-201ENST00000220888 GSPT2Q8IYD1 628 aaKnown RBP10.89□□□□□ -0.67
TRPS1-201ENST00000220888 RIN3Q8TB24 985 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 CCDC126Q96EE4 140 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 CDCA5Q96FF9 252 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 PRRG3Q9BZD7 231 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 TRIT1Q9H3H1 467 aaKnown RBP10.89□□□□□ -0.67
TRPS1-201ENST00000220888 PXMP2Q9NR77 195 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 TIMM13Q9Y5L4 95 aaPredicted RBP10.89□□□□□ -0.67
TRPS1-201ENST00000220888 MEI4A8MW99 385 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 RAMP2O60895 175 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 CPSF4O95639 269 aaKnown RBP10.89□□□□□ -0.67
TRPS1-201ENST00000220888 SERPINF2P08697 491 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 AKAP5P24588 427 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 POLR2LP62875 67 aaKnown RBP10.89□□□□□ -0.67
TRPS1-201ENST00000220888 BST2Q10589 180 aaKnown RBP10.89□□□□□ -0.67
TRPS1-201ENST00000220888 PGS1Q32NB8 556 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 ILDR2Q71H61 639 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 ATP8B4Q8TF62 1192 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 FICDQ9BVA6 458 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 DDX28Q9NUL7 540 aaKnown RBP10.89□□□□□ -0.67
TRPS1-201ENST00000220888 SNTG2Q9NY99 539 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 ZNF229Q9UJW7 825 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 CRYL1Q9Y2S2 319 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 HS6ST1O60243 411 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 DEAF1O75398 565 aaPredicted RBP10.89□□□□□ -0.67
TRPS1-201ENST00000220888 CNPP09543 421 aaKnown RBP10.89□□□□□ -0.67
TRPS1-201ENST00000220888 COMTP21964 271 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 MARSP56192 900 aaKnown RBP10.89□□□□□ -0.67
TRPS1-201ENST00000220888 C21orf59P57076 290 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 PPP4CP60510 307 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 DNAL1Q4LDG9 190 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 KRT77Q7Z794 578 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 PALB2Q86YC2 1186 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 MED8Q96G25 268 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 FAM118BQ9BPY3 351 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 ADI1Q9BV57 179 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 ACTR8Q9H981 624 aa10.89□□□□□ -0.67
TRPS1-201ENST00000220888 SSU72P8A0A1W2PR75 194 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 AXLP30530 894 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 DSG3P32926 999 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRPS1-201ENST00000220888 ACVR2BQ13705 512 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 GALNTL6Q49A17 601 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 LAYNQ6UX15 382 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 CCNJLQ8IV13 435 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 ADSSL1Q8N142 457 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 FAM172AQ8WUF8 416 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 SLC28A3Q9HAS3 691 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 CYP3A43Q9HB55 503 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 SNCAIPQ9Y6H5 919 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 ATMINO43313 823 aaPredicted RBP10.88□□□□□ -0.67
TRPS1-201ENST00000220888 CD2BP2O95400 341 aaKnown RBP10.88□□□□□ -0.67
TRPS1-201ENST00000220888 ZNF24P17028 368 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 GGCXP38435 758 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 NPY2RP49146 381 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 RALGDSQ12967 914 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 CNGA3Q16281 694 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 SETMARQ53H47 684 aaPredicted RBP10.88□□□□□ -0.67
TRPS1-201ENST00000220888 CBWD3Q5JTY5 395 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 CBWD5Q5RIA9 395 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 C4orf33Q8N1A6 199 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 EME1Q96AY2 570 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 ATP6V1G3Q96LB4 118 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 TBC1D13Q9NVG8 400 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 POLLQ9UGP5 575 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 HPS5Q9UPZ3 1129 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 TMX2Q9Y320 296 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 ADGRG1Q9Y653 693 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 V9GYQ6 96 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 FOXN1O15353 648 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 PYGMP11217 842 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 GNA13Q14344 377 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 NAB2Q15742 525 aa10.88□□□□□ -0.67
TRPS1-201ENST00000220888 TRIM71Q2Q1W2 868 aaKnown RBP10.88□□□□□ -0.67
TRPS1-201ENST00000220888 MROH9Q5TGP6 573 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms