RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 TMCO4Q5TGY1 634 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 FASTKD5Q7L8L6 764 aaKnown RBP14.16□□□□□ -0.14
GABPB1-201ENST00000220429 ADAT2Q7Z6V5 191 aaKnown RBP14.16□□□□□ -0.14
GABPB1-201ENST00000220429 GRAMD2AQ8IUY3 354 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 CENPSQ8N2Z9 138 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 ESX1Q8N693 406 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 XXYLT1Q8NBI6 393 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 FAM172AQ8WUF8 416 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 AS3MTQ9HBK9 375 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 GPAMQ9HCL2 828 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 TCEAL9Q9UHQ7 104 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 ZNF214Q9UL59 606 aaPredicted RBP14.16□□□□□ -0.14
GABPB1-201ENST00000220429 LCTP09848 1927 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 ZNF541Q9H0D2 1346 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 LTBP3Q9NS15 1303 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 K7EPI3 171 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 CCND2P30279 289 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 CETN2P41208 172 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 RPS3AP61247 264 aaKnown RBP14.16□□□□□ -0.14
GABPB1-201ENST00000220429 CD300CQ08708 224 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 DCAF6Q58WW2 860 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 ANGEL2Q5VTE6 544 aaKnown RBP14.16□□□□□ -0.14
GABPB1-201ENST00000220429 SRCAPQ6ZRS2 3230 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 ANKRD13BQ86YJ7 626 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 DDI1Q8WTU0 396 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 PANX3Q96QZ0 392 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 CYLDQ9NQC7 956 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 ANKEF1Q9NU02 776 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 RSL24D1Q9UHA3 163 aaKnown RBP14.16□□□□□ -0.14
GABPB1-201ENST00000220429 ADAMTS5Q9UNA0 930 aa14.16□□□□□ -0.14
GABPB1-201ENST00000220429 LOC105371267A0A1B0GV96 52 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 TBKBP1A7MCY6 615 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 FOXN3O00409 490 aaPredicted RBP14.15□□□□□ -0.14
GABPB1-201ENST00000220429 PFDN6O15212 129 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 RGS20O76081 388 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 BAIAP3O94812 1187 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 RARBP10826 455 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 TCEA1P23193 301 aaKnown RBP14.15□□□□□ -0.14
GABPB1-201ENST00000220429 DSG3P32926 999 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 SERPINB6P35237 376 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 GCLMP48507 274 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 FOLH1Q04609 750 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 LPCAT4Q643R3 524 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 SLFN11Q7Z7L1 901 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 DHDDSQ86SQ9 333 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 ANKMY2Q8IV38 441 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 FAM20CQ8IXL6 584 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 ZNF398Q8TD17 642 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 PTCD2Q8WV60 388 aaKnown RBP14.15□□□□□ -0.14
GABPB1-201ENST00000220429 GPRASP2Q96D09 838 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 CDC42EP4Q9H3Q1 356 aaKnown RBP14.15□□□□□ -0.14
GABPB1-201ENST00000220429 ERVK-5Q9HDB9 667 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 NPHS2Q9NP85 383 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 FKBP6O75344 327 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 MTRF1O75570 445 aaKnown RBP14.15□□□□□ -0.14
GABPB1-201ENST00000220429 ADRB2P07550 413 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 CHRNB1P11230 501 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 LMNB1P20700 586 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 NCOA4Q13772 614 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 TMEM132BQ14DG7 1078 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 EPC2Q52LR7 807 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 ZNF746Q6NUN9 644 aaPredicted RBP14.15□□□□□ -0.14
GABPB1-201ENST00000220429 XRRA1Q6P2D8 792 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 NLRX1Q86UT6 975 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 ARHGEF19Q8IW93 802 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 ANKRD35Q8N283 1001 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 MORC4Q8TE76 937 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 HES6Q96HZ4 224 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 C12orf42Q96LP6 360 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 KIFC3Q9BVG8 833 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 IRF2BPLQ9H1B7 796 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 TBK1Q9UHD2 729 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 NEU2Q9Y3R4 380 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 PCDHA10Q9Y5I2 948 aa14.15□□□□□ -0.14
GABPB1-201ENST00000220429 STAMBPO95630 424 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 S100BP04271 92 aaPredicted RBP14.14□□□□□ -0.15
GABPB1-201ENST00000220429 RFX1P22670 979 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 GPC3P51654 580 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 KCNJ8Q15842 424 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 ZNF568Q3ZCX4 644 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 CCDC62Q6P9F0 684 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 OTOAQ7RTW8 1153 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 NT5DC3Q86UY8 548 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 LZTR1Q8N653 840 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 GOLM1Q8NBJ4 401 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 TMEM161BQ8NDZ6 487 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 RDM1Q8NG50 284 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 CTRCQ99895 268 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 UBE2TQ9NPD8 197 aaPredicted RBP14.14□□□□□ -0.15
GABPB1-201ENST00000220429 NCANO14594 1321 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 IGSF9BQ9UPX0 1349 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 GOLGA8IPA6NC78 632 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 GOLGA8JA6NMD2 632 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 ANKRD63C9JTQ0 380 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 MCF2LO15068 1137 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 ITM2AO43736 263 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 ADSSP30520 456 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 NPTX2P47972 431 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 OAZ1P54368 228 aa14.14□□□□□ -0.15
GABPB1-201ENST00000220429 NR1H2P55055 460 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms