RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TAF5Q15542 800 aa28.6■■■□□ 2.17
CHMP4B-201ENST00000217402 PABPC1LQ4VXU2 614 aaKnown RBP28.6■■■□□ 2.17
CHMP4B-201ENST00000217402 HFE2Q6ZVN8 426 aa28.6■■■□□ 2.17
CHMP4B-201ENST00000217402 PDZD4Q76G19 769 aaPredicted RBP28.6■■■□□ 2.17
CHMP4B-201ENST00000217402 GPR149Q86SP6 731 aa28.6■■■□□ 2.17
CHMP4B-201ENST00000217402 ZDHHC17Q8IUH5 632 aa28.6■■■□□ 2.17
CHMP4B-201ENST00000217402 FAM149B1Q96BN6 582 aa28.6■■■□□ 2.17
CHMP4B-201ENST00000217402 NMUR1Q9HB89 426 aa28.6■■■□□ 2.17
CHMP4B-201ENST00000217402 ANKRD62A6NC57 917 aa28.59■■■□□ 2.17
CHMP4B-201ENST00000217402 TADA3O75528 432 aa28.59■■■□□ 2.17
CHMP4B-201ENST00000217402 GRAP2O75791 330 aa28.59■■■□□ 2.17
CHMP4B-201ENST00000217402 GJB6O95452 261 aa28.59■■■□□ 2.17
CHMP4B-201ENST00000217402 ZNF268Q14587 947 aaPredicted RBP28.59■■■□□ 2.17
CHMP4B-201ENST00000217402 DNAJC24Q6P3W2 148 aa28.59■■■□□ 2.17
CHMP4B-201ENST00000217402 SCML4Q8N228 414 aa28.59■■■□□ 2.17
CHMP4B-201ENST00000217402 IRGQQ8WZA9 623 aa28.59■■■□□ 2.17
CHMP4B-201ENST00000217402 MCRS1Q96EZ8 462 aa28.59■■■□□ 2.17
CHMP4B-201ENST00000217402 MSLNLQ96KJ4 702 aa28.59■■■□□ 2.17
CHMP4B-201ENST00000217402 ADAM7Q9H2U9 754 aa28.59■■■□□ 2.17
CHMP4B-201ENST00000217402 METTL5Q9NRN9 209 aaKnown RBP28.59■■■□□ 2.17
CHMP4B-201ENST00000217402 WDR35Q9P2L0 1181 aa28.59■■■□□ 2.17
CHMP4B-201ENST00000217402 H3BQ06 376 aaPredicted RBP28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 SART1O43290 800 aaKnown RBP28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 MYBL1P10243 752 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 GJA1P17302 382 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 CCR2P41597 374 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 YWHAGP61981 247 aaKnown RBP eCLIP28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 C10orf76Q5T2E6 689 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 GAREM2Q75VX8 874 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 SCD5Q86SK9 330 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 TMEM150AQ86TG1 271 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 PDZD8Q8NEN9 1154 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 CTNNBL1Q8WYA6 563 aaPredicted RBP28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 ARHGEF26Q96DR7 871 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 S1PR5Q9H228 398 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 UBE2ZQ9H832 354 aaPredicted RBP28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 LUC7LQ9NQ29 371 aaKnown RBP28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 TLR8Q9NR97 1041 aaKnown RBP28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 TRPM5Q9NZQ8 1165 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 TFR2Q9UP52 801 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 ZNF638Q14966 1978 aaKnown RBP28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 A0A1W2PRU2 124 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 NRG2O14511 850 aaPredicted RBP28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 F11P03951 625 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 KCNA5P22460 613 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 EPHA5P54756 1037 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 RNASE9P60153 205 aaKnown RBP28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 ITIH3Q06033 890 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 SLC5A9Q2M3M2 681 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 CES5AQ6NT32 575 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 MON1AQ86VX9 555 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 C3orf20Q8ND61 904 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 GOLGA1Q92805 767 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 TCEAL4Q96EI5 215 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 GCNAQ96QF7 691 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 ATXN3LQ9H3M9 355 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 OSER1Q9NX31 292 aa28.58■■■□□ 2.17
CHMP4B-201ENST00000217402 LTFP02788 710 aa28.57■■■□□ 2.16
CHMP4B-201ENST00000217402 GSCP56915 257 aaPredicted RBP28.57■■■□□ 2.16
CHMP4B-201ENST00000217402 GPC5P78333 572 aa28.57■■■□□ 2.16
CHMP4B-201ENST00000217402 KRT83P78385 493 aa28.57■■■□□ 2.16
CHMP4B-201ENST00000217402 CYP4F8P98187 520 aa28.57■■■□□ 2.16
CHMP4B-201ENST00000217402 SLC26A9Q7LBE3 791 aa28.57■■■□□ 2.16
CHMP4B-201ENST00000217402 LEMD2Q8NC56 503 aa28.57■■■□□ 2.16
CHMP4B-201ENST00000217402 OVCA2Q8WZ82 227 aa28.57■■■□□ 2.16
CHMP4B-201ENST00000217402 EDEM1Q92611 657 aa28.57■■■□□ 2.16
CHMP4B-201ENST00000217402 SELENOOQ9BVL4 669 aa28.57■■■□□ 2.16
CHMP4B-201ENST00000217402 ZNF840PA6NDX5 716 aa28.56■■■□□ 2.16
CHMP4B-201ENST00000217402 TMEM253P0C7T8 217 aa28.56■■■□□ 2.16
CHMP4B-201ENST00000217402 CDC25CP30307 473 aa28.56■■■□□ 2.16
CHMP4B-201ENST00000217402 EFHC1Q5JVL4 640 aa28.56■■■□□ 2.16
CHMP4B-201ENST00000217402 BSPRYQ5W0U4 402 aa28.56■■■□□ 2.16
CHMP4B-201ENST00000217402 KIAA1328Q86T90 577 aa28.56■■■□□ 2.16
CHMP4B-201ENST00000217402 ARHGAP18Q8N392 663 aa28.56■■■□□ 2.16
CHMP4B-201ENST00000217402 CD207Q9UJ71 328 aa28.56■■■□□ 2.16
CHMP4B-201ENST00000217402 ADGRG1Q9Y653 693 aa28.56■■■□□ 2.16
CHMP4B-201ENST00000217402 C2orf16Q68DN1 1984 aa28.56■■■□□ 2.16
CHMP4B-201ENST00000217402 TCRBV5S1A1TA0A578 114 aa28.55■■■□□ 2.16
CHMP4B-201ENST00000217402 YWHAZP63104 245 aaKnown RBP28.55■■■□□ 2.16
CHMP4B-201ENST00000217402 MAMLD1Q13495 774 aa28.55■■■□□ 2.16
CHMP4B-201ENST00000217402 BTBD8Q5XKL5 378 aa28.55■■■□□ 2.16
CHMP4B-201ENST00000217402 PLEKHA7Q6IQ23 1121 aa28.55■■■□□ 2.16
CHMP4B-201ENST00000217402 SMRP1Q8NCR6 262 aa28.55■■■□□ 2.16
CHMP4B-201ENST00000217402 SHKBP1Q8TBC3 707 aa28.55■■■□□ 2.16
CHMP4B-201ENST00000217402 PARVAQ9NVD7 372 aa28.55■■■□□ 2.16
CHMP4B-201ENST00000217402 DOCK6Q96HP0 2047 aa28.55■■■□□ 2.16
CHMP4B-201ENST00000217402 HSF2BPO75031 334 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 FGF19O95750 216 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 ZDHHC11BP0C7U3 371 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 KRT3P12035 628 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 SCNN1AP37088 669 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 PRSS36Q5K4E3 855 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 ATAT1Q5SQI0 421 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 EMC1Q8N766 993 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 KHSRPQ92945 711 aaKnown RBP eCLIP28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 MCEEQ96PE7 176 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 AVENQ9NQS1 362 aaPredicted RBP28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 MRPS23Q9Y3D9 190 aaKnown RBP28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 BRWD1Q9NSI6 2320 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms