RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 MED15Q96RN5 788 aa29.62■■■□□ 2.33
PDCD2-201ENST00000167218 SRRTQ9BXP5 876 aaKnown RBP29.62■■■□□ 2.33
PDCD2-201ENST00000167218 NMUR1Q9HB89 426 aa29.62■■■□□ 2.33
PDCD2-201ENST00000167218 TLR8Q9NR97 1041 aaKnown RBP29.62■■■□□ 2.33
PDCD2-201ENST00000167218 USP3Q9Y6I4 520 aa29.62■■■□□ 2.33
PDCD2-201ENST00000167218 K7ESF4 209 aa29.61■■■□□ 2.33
PDCD2-201ENST00000167218 SCAMP3O14828 347 aaKnown RBP29.61■■■□□ 2.33
PDCD2-201ENST00000167218 CYP26A1O43174 497 aa29.61■■■□□ 2.33
PDCD2-201ENST00000167218 TLR5O60602 858 aa29.61■■■□□ 2.33
PDCD2-201ENST00000167218 NR1H3Q13133 447 aa29.61■■■□□ 2.33
PDCD2-201ENST00000167218 SUMF1Q8NBK3 374 aa29.61■■■□□ 2.33
PDCD2-201ENST00000167218 CYLDQ9NQC7 956 aa29.61■■■□□ 2.33
PDCD2-201ENST00000167218 E2F8A0AVK6 867 aa29.6■■■□□ 2.33
PDCD2-201ENST00000167218 P4HA2O15460 535 aa29.6■■■□□ 2.33
PDCD2-201ENST00000167218 GNA14O95837 355 aa29.6■■■□□ 2.33
PDCD2-201ENST00000167218 TBX18O95935 607 aa29.6■■■□□ 2.33
PDCD2-201ENST00000167218 CYP17A1P05093 508 aa29.6■■■□□ 2.33
PDCD2-201ENST00000167218 DRD1P21728 446 aa29.6■■■□□ 2.33
PDCD2-201ENST00000167218 PPP2R5DQ14738 602 aa29.6■■■□□ 2.33
PDCD2-201ENST00000167218 CLEC17AQ6ZS10 378 aa29.6■■■□□ 2.33
PDCD2-201ENST00000167218 ATRIPQ8WXE1 791 aa29.6■■■□□ 2.33
PDCD2-201ENST00000167218 CD101Q93033 1021 aa29.6■■■□□ 2.33
PDCD2-201ENST00000167218 WBP2Q969T9 261 aa29.6■■■□□ 2.33
PDCD2-201ENST00000167218 UBXN6Q9BZV1 441 aa29.6■■■□□ 2.33
PDCD2-201ENST00000167218 SLC9A3R1O14745 358 aaPredicted RBP29.59■■■□□ 2.33
PDCD2-201ENST00000167218 TBXAS1P24557 533 aaPredicted RBP29.59■■■□□ 2.33
PDCD2-201ENST00000167218 OPRD1P41143 372 aa29.59■■■□□ 2.33
PDCD2-201ENST00000167218 KCNH2Q12809 1159 aa29.59■■■□□ 2.33
PDCD2-201ENST00000167218 DHCR24Q15392 516 aa29.59■■■□□ 2.33
PDCD2-201ENST00000167218 SCD5Q86SK9 330 aa29.59■■■□□ 2.33
PDCD2-201ENST00000167218 TTC30AQ86WT1 665 aa29.59■■■□□ 2.33
PDCD2-201ENST00000167218 ANKRD52Q8NB46 1076 aa29.59■■■□□ 2.33
PDCD2-201ENST00000167218 RWDD2AQ9UIY3 292 aa29.59■■■□□ 2.33
PDCD2-201ENST00000167218 HOXC13P31276 330 aa29.58■■■□□ 2.33
PDCD2-201ENST00000167218 RHBDF2Q6PJF5 856 aa29.58■■■□□ 2.33
PDCD2-201ENST00000167218 KIAA1549LQ6ZVL6 1849 aa29.58■■■□□ 2.33
PDCD2-201ENST00000167218 CCDC186Q7Z3E2 898 aa29.58■■■□□ 2.33
PDCD2-201ENST00000167218 KAT5Q92993 513 aa29.58■■■□□ 2.33
PDCD2-201ENST00000167218 NT5C1BQ96P26 610 aa29.58■■■□□ 2.33
PDCD2-201ENST00000167218 KLF16Q9BXK1 252 aaPredicted RBP29.58■■■□□ 2.33
PDCD2-201ENST00000167218 CLSTN2Q9H4D0 955 aa29.58■■■□□ 2.33
PDCD2-201ENST00000167218 A0A1W2PQH9 124 aa29.57■■■□□ 2.32
PDCD2-201ENST00000167218 GREM1O60565 184 aa29.57■■■□□ 2.32
PDCD2-201ENST00000167218 NRLP54845 237 aa29.57■■■□□ 2.32
PDCD2-201ENST00000167218 YWHAEP62258 255 aaKnown RBP29.57■■■□□ 2.32
PDCD2-201ENST00000167218 DMWDQ09019 674 aa29.57■■■□□ 2.32
PDCD2-201ENST00000167218 RAB41Q5JT25 222 aa29.57■■■□□ 2.32
PDCD2-201ENST00000167218 PIGZQ86VD9 579 aa29.57■■■□□ 2.32
PDCD2-201ENST00000167218 MTPAPQ9NVV4 582 aaKnown RBP eCLIP29.57■■■□□ 2.32
PDCD2-201ENST00000167218 TBC1D14Q9P2M4 693 aa29.57■■■□□ 2.32
PDCD2-201ENST00000167218 CHURC1-FNTBB4DL54 471 aa29.56■■■□□ 2.32
PDCD2-201ENST00000167218 RNF40O75150 1001 aa29.56■■■□□ 2.32
PDCD2-201ENST00000167218 FBXO43Q4G163 708 aa29.56■■■□□ 2.32
PDCD2-201ENST00000167218 KLHDC10Q6PID8 442 aa29.56■■■□□ 2.32
PDCD2-201ENST00000167218 ZNF276Q8N554 614 aa29.56■■■□□ 2.32
PDCD2-201ENST00000167218 EHBP1Q8NDI1 1231 aa29.56■■■□□ 2.32
PDCD2-201ENST00000167218 EXOC4Q96A65 974 aa29.56■■■□□ 2.32
PDCD2-201ENST00000167218 EPC1Q9H2F5 836 aa29.56■■■□□ 2.32
PDCD2-201ENST00000167218 TSPAN16Q9UKR8 245 aa29.56■■■□□ 2.32
PDCD2-201ENST00000167218 SPTBN4Q9H254 2564 aa29.56■■■□□ 2.32
PDCD2-201ENST00000167218 TULP2O00295 520 aa29.55■■■□□ 2.32
PDCD2-201ENST00000167218 AFPP02771 609 aaKnown RBP29.55■■■□□ 2.32
PDCD2-201ENST00000167218 RARGP13631 454 aa29.55■■■□□ 2.32
PDCD2-201ENST00000167218 HOXA6P31267 233 aa29.55■■■□□ 2.32
PDCD2-201ENST00000167218 ATP5C1P36542 298 aaKnown RBP29.55■■■□□ 2.32
PDCD2-201ENST00000167218 CETN1Q12798 172 aa29.55■■■□□ 2.32
PDCD2-201ENST00000167218 GOLGA7BQ2TAP0 167 aa29.55■■■□□ 2.32
PDCD2-201ENST00000167218 SGO2Q562F6 1265 aa29.55■■■□□ 2.32
PDCD2-201ENST00000167218 OTUB2Q96DC9 234 aa29.55■■■□□ 2.32
PDCD2-201ENST00000167218 NACA2Q9H009 215 aa29.55■■■□□ 2.32
PDCD2-201ENST00000167218 NUDT5Q9UKK9 219 aa29.55■■■□□ 2.32
PDCD2-201ENST00000167218 SH3BP1Q9Y3L3 701 aa29.55■■■□□ 2.32
PDCD2-201ENST00000167218 UTP18Q9Y5J1 556 aaKnown RBP eCLIP29.55■■■□□ 2.32
PDCD2-201ENST00000167218 RNF225M0QZC1 329 aaPredicted RBP29.54■■■□□ 2.32
PDCD2-201ENST00000167218 CCDC192P0DO97 292 aa29.54■■■□□ 2.32
PDCD2-201ENST00000167218 VDRP11473 427 aa29.54■■■□□ 2.32
PDCD2-201ENST00000167218 PDE4CQ08493 712 aa29.54■■■□□ 2.32
PDCD2-201ENST00000167218 ARHGEF19Q8IW93 802 aa29.54■■■□□ 2.32
PDCD2-201ENST00000167218 BBS7Q8IWZ6 715 aa29.54■■■□□ 2.32
PDCD2-201ENST00000167218 PPM1KQ8N3J5 372 aa29.54■■■□□ 2.32
PDCD2-201ENST00000167218 CLIC5Q9NZA1 410 aa29.54■■■□□ 2.32
PDCD2-201ENST00000167218 KIAA1257Q9ULG3 409 aa29.54■■■□□ 2.32
PDCD2-201ENST00000167218 O00370 1275 aa29.53■■■□□ 2.32
PDCD2-201ENST00000167218 FGFR1OPO95684 399 aaKnown RBP29.53■■■□□ 2.32
PDCD2-201ENST00000167218 IRF1P10914 325 aa29.53■■■□□ 2.32
PDCD2-201ENST00000167218 FNTBP49356 437 aa29.53■■■□□ 2.32
PDCD2-201ENST00000167218 PSEN1P49768 467 aa29.53■■■□□ 2.32
PDCD2-201ENST00000167218 PKDCCQ504Y2 493 aa29.53■■■□□ 2.32
PDCD2-201ENST00000167218 LY6G5CQ5SRR4 150 aa29.53■■■□□ 2.32
PDCD2-201ENST00000167218 TMEM270Q6UE05 265 aa29.53■■■□□ 2.32
PDCD2-201ENST00000167218 HTR3DQ70Z44 454 aa29.53■■■□□ 2.32
PDCD2-201ENST00000167218 IRF2BP1Q8IU81 584 aa29.53■■■□□ 2.32
PDCD2-201ENST00000167218 MLKLQ8NB16 471 aa29.53■■■□□ 2.32
PDCD2-201ENST00000167218 TFAP2BQ92481 460 aa29.53■■■□□ 2.32
PDCD2-201ENST00000167218 POLR3BQ9NW08 1133 aaPredicted RBP29.53■■■□□ 2.32
PDCD2-201ENST00000167218 NAGPAQ9UK23 515 aa29.53■■■□□ 2.32
PDCD2-201ENST00000167218 MYO18AQ92614 2054 aaKnown RBP29.52■■■□□ 2.32
PDCD2-201ENST00000167218 XPO1O14980 1071 aaKnown RBP29.52■■■□□ 2.32
PDCD2-201ENST00000167218 MDM4O15151 490 aa29.52■■■□□ 2.32
PDCD2-201ENST00000167218 ATG13O75143 517 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms